Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D10
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 34 0.074
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 34 0.074
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 31 0.69
Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose d... 30 1.2
Z82086-1|CAB04993.1| 738|Caenorhabditis elegans Hypothetical pr... 29 1.6
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 29 1.6
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81047-10|CAB02836.1| 215|Caenorhabditis elegans Hypothetical p... 29 2.8
Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 2.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 2.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 2.8
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 3.7
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 28 4.8
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF216968-1|AAF60253.2| 658|Caenorhabditis elegans semaphorin-2a... 28 4.8
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 4.8
AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen pro... 28 4.8
AC025726-1|AAK73921.1| 658|Caenorhabditis elegans Male abnormal... 28 4.8
AC024814-1|AAF59560.3| 295|Caenorhabditis elegans Hypothetical ... 28 4.8
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 28 4.8
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 27 6.4
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 27 6.4
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 27 6.4
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 27 6.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 27 6.4
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.5
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 27 8.5
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 27 8.5
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 27 8.5
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 27 8.5
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 27 8.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 27 8.5
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 176 GATGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPG 280
G G++K EV P+ AP PPG PG PG
Sbjct: 258 GEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPG 292
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 176 GATGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPG 280
G G++K EV P+ AP PPG PG PG
Sbjct: 239 GEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGPPG 273
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 0.69
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 147 TGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRNSPA 34
+G GSGS D +G P+R + +P + PR PA
Sbjct: 158 SGSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPPA 195
>Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical
protein F29F11.1 protein.
Length = 481
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 168 VHTPTKLTGKGSGSDQDMNGIDSPSR 91
V+TPTK+ G+G G D+ ++S SR
Sbjct: 94 VNTPTKMYGRGKGMAPDLKYVESVSR 119
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 203 VQPSAPVAAPLYSAPPGYPGVQAHPG 280
VQP P P PPG PG Q HPG
Sbjct: 705 VQPPQPQQPP--QGPPGPPGPQQHPG 728
>AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose
dehydrogenase protein.
Length = 481
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 168 VHTPTKLTGKGSGSDQDMNGIDSPSR 91
V+TPTK+ G+G G D+ ++S SR
Sbjct: 94 VNTPTKMYGRGKGMAPDLKYVESVSR 119
>Z82086-1|CAB04993.1| 738|Caenorhabditis elegans Hypothetical
protein ZK228.1 protein.
Length = 738
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 395 PRVALWQRTMVLQNNLALRLLHPVGPGHLKRLPRCQHHHQ 276
P ++LW + V Q+ L HP G +RL R H+H+
Sbjct: 513 PSMSLWAKAEVRQSLTRLFDPHPFGDETTRRLDRVGHNHR 552
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 206 QPSAPVAAPLYSAPPGYPGVQAH-PGGGAGI 295
Q P +AP+YSAPP Y Q + P GG I
Sbjct: 244 QQGPPPSAPVYSAPPPYNNFQQNSPYGGRPI 274
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPG 280
P+ P P Y PPG PG+ PG
Sbjct: 54 PTRPRGQPGYGGPPGPPGLPGQPG 77
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 182 TGSWKI-EVQPSAPVAAPLYSAPPGYPGVQAHPG--GGAG 292
T S+ + EV S P+ P PPG PG HPG G AG
Sbjct: 89 TNSYAVPEVGGSMPLICP--EGPPGRPGHPGHPGEDGSAG 126
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPG 280
P+ P+ +P PPG PG +PG
Sbjct: 142 PAGPMGSPGPDGPPGVPGATGNPG 165
>Z81047-10|CAB02836.1| 215|Caenorhabditis elegans Hypothetical
protein C41G6.12 protein.
Length = 215
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 496 TYENLVIRFAMFKTTPWYIGTSVRWHQF 413
TY +V + F TP+Y SV+W F
Sbjct: 79 TYSLVVYKITKFNITPYYPNGSVQWENF 106
>Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical
protein C01H6.1 protein.
Length = 307
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 173 WGATGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPG 280
+G SW + +P+ PV P PPG G +PG
Sbjct: 87 YGGLPSW-CQCEPTKPVCPPGPPGPPGNSGSPGNPG 121
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 176 GATGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPG 280
G G+ QP AP APPG PG PG
Sbjct: 186 GTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGEPG 220
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPG--GGAGI 295
P P AP PPG PG + PG G AG+
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAGV 263
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPG--GGAGI 295
P P AP PPG PG + PG G AG+
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAGV 263
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPGGGAGI 295
P P P PG PG+ PG GA +
Sbjct: 100 PPGPPGYPGAQGEPGLPGIAGQPGSGARV 128
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 239 SAPPGYPGVQAHPGGGAG 292
+ PPG PG PGGG+G
Sbjct: 177 AGPPGPPGPDGAPGGGSG 194
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = +2
Query: 227 APLYSAPPGYPGVQAHPG--GGAG 292
AP PPG PG Q HPG G AG
Sbjct: 243 APGPQGPPGPPGQQGHPGQAGPAG 266
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 239 SAPPGYPGVQAHPGGGAG 292
+ PPG PG PGGG+G
Sbjct: 177 AGPPGPPGPDGAPGGGSG 194
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPG 280
P+ P+ P PPG PG+ PG
Sbjct: 162 PAGPMGPPGPRGPPGVPGITGAPG 185
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 120 DMNGIDSP--SRPADIMPLSQRTQKPRNSPA 34
D++G ++ +RPA I P+S KP NSP+
Sbjct: 62 DLSGKEAEIIARPAPIAPVSSDASKPSNSPS 92
>AF216968-1|AAF60253.2| 658|Caenorhabditis elegans semaphorin-2a
protein.
Length = 658
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 348 KIVLENHCTLPERNTRAQLCQENWCHRTD 434
+IV+ +C P + CQ WC + D
Sbjct: 603 RIVVHENCARPTSVAEYRSCQREWCKKAD 631
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 182 TGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPG 280
TG + P+ P AP + PPGY G PG
Sbjct: 146 TGGSECVKCPAGPPGAPGPNGPPGYEGQMGVPG 178
>AF000263-19|AAG00021.1| 321|Caenorhabditis elegans Collagen
protein 56 protein.
Length = 321
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 176 GATGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPG 280
G+ G + QP P +APPG PG++ PG
Sbjct: 213 GSVGPRGLTGQPGMP--GRTVNAPPGSPGIRGRPG 245
>AC025726-1|AAK73921.1| 658|Caenorhabditis elegans Male abnormal
protein 20, isoform a protein.
Length = 658
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 348 KIVLENHCTLPERNTRAQLCQENWCHRTD 434
+IV+ +C P + CQ WC + D
Sbjct: 603 RIVVHENCARPTSVAEYRSCQREWCKKAD 631
>AC024814-1|AAF59560.3| 295|Caenorhabditis elegans Hypothetical
protein Y54F10AR.2 protein.
Length = 295
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = -3
Query: 415 FSWQSCALVLRSGNVQWFSRTILPSDYCTRW---DLAT*SVCPDASTTTRMRLN 263
+ + S +R G+ W R P DY +W + +C A + +RLN
Sbjct: 229 YKFDSLLNEIRKGSQMWSQRIKTPKDYTFKWPRYTIVELDICQQAYSQMPIRLN 282
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 197 IEVQPSA--PVAAPLYSAPPGYPGVQAHP 277
I QP+ PV P APPGYP A+P
Sbjct: 452 IHQQPAQLHPVQLPQVMAPPGYPTQAAYP 480
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 198 IFQEPVAPQPVHTP--TKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRN 43
I+++ +A P+ TP T LT GS S D P P + TQ+P +
Sbjct: 87 IYEQQLASMPM-TPAITDLTRHGSSSSPSTTNSDPPYSPEGLNNFGLGTQRPNH 139
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 176 GATGSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPGGGAG 292
GA G ++ Q + AP + P G PG PG G
Sbjct: 188 GAPGQPGVDAQSQSTPGAPGQAGPQGPPGSSGAPGAPGG 226
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 198 IFQEPVAPQPVHTP--TKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRN 43
I+++ +A P+ TP T LT GS S D P P + TQ+P +
Sbjct: 87 IYEQQLASMPM-TPAITDLTRHGSSSSPSTTNSDPPYSPEGLNNFGLGTQRPNH 139
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 198 IFQEPVAPQPVHTP--TKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRN 43
I+++ +A P+ TP T LT GS S D P P + TQ+P +
Sbjct: 85 IYEQQLASMPM-TPAITDLTRHGSSSSPSTTNSDPPYSPEGLNNFGLGTQRPNH 137
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 198 IFQEPVAPQPVHTP--TKLTGKGSGSDQDMNGIDSPSRPADIMPLSQRTQKPRN 43
I+++ +A P+ TP T LT GS S D P P + TQ+P +
Sbjct: 36 IYEQQLASMPM-TPAITDLTRHGSSSSPSTTNSDPPYSPEGLNNFGLGTQRPNH 88
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 239 SAPPGYPGVQAHPGGGAGI 295
+ PPG PG PGGG G+
Sbjct: 261 AGPPGPPGNNGAPGGGYGV 279
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 212 SAPVAAPLYSAPPGYPGVQAHPG 280
++P AAP + PPG PG PG
Sbjct: 242 ASPTAAPGAAGPPGPPGPAGAPG 264
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/52 (25%), Positives = 18/52 (34%)
Frame = +2
Query: 200 EVQPSAPVAAPLYSAPPGYPGVQAHPGGGAGIWADASXXXXXXXXXXXXXDC 355
+ +P+ P P PPG PG PG D++ DC
Sbjct: 109 QCEPTKPTCPPGPPGPPGQPGAPGVPGAPGPRGGDSTVTYAPINCPQVSFDC 160
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/52 (25%), Positives = 18/52 (34%)
Frame = +2
Query: 200 EVQPSAPVAAPLYSAPPGYPGVQAHPGGGAGIWADASXXXXXXXXXXXXXDC 355
+ +P+ P P PPG PG PG D++ DC
Sbjct: 93 QCEPTKPTCPPGPPGPPGQPGAPGVPGAPGPRGGDSTVTYAPINCPQVSFDC 144
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +2
Query: 176 GATGSWKIEVQPSAPVAAPLY---SAPPGYPGVQAHPG 280
G G ++V+P A + PPG PG HPG
Sbjct: 167 GKPGLDSLDVEPQAQGTGTCFHCPQGPPGSPGPMGHPG 204
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 212 SAPVAAPLYSAPPGYPGVQAHPG 280
++P AAP + PPG PG PG
Sbjct: 241 ASPTAAPGAAGPPGPPGPAGAPG 263
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 203 VQPSAPVAAPLYSAPPGYPGVQAHPG 280
V P+ P P PPG PG PG
Sbjct: 146 VGPAGPAGGPGPKGPPGPPGGHGEPG 171
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 209 PSAPVAAPLYSAPPGYPGVQAHPGGGAG 292
P P P + PG PG PG G G
Sbjct: 159 PPGPAGEPGHDGAPGAPGKPGAPGVGGG 186
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 200 EVQPSAPVAAPLYSAPPGYPGVQAHPG 280
+ +P+ P P PPG PG PG
Sbjct: 93 QCEPTKPTCPPGPPGPPGQPGAPGTPG 119
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 200 EVQPSAPVAAPLYSAPPGYPGVQAHPG 280
+ +P+ P P PPG PG PG
Sbjct: 93 QCEPTKPTCPPGPPGPPGQPGAPGTPG 119
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 200 EVQPSAPVAAPLYSAPPGYPGVQAHPG 280
+ +P+ P P PPG PG PG
Sbjct: 105 QCEPTKPTCPPGPPGPPGQPGAPGTPG 131
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 185 GSWKIEVQPSAPVAAPLYSAPPGYPGVQAHPGGG 286
G+ E P+ P P PG PG PG G
Sbjct: 194 GAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAG 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,671,546
Number of Sequences: 27780
Number of extensions: 362863
Number of successful extensions: 1740
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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