Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D10
         (534 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    23   1.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.0  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.9  

>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 316 PGPTGCSSRRAR 351
           PGP GC  RR R
Sbjct: 1   PGPNGCPRRRGR 12


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 117 MNGIDSPSRPADIMPLSQRTQ 55
           +NG++   RP ++   SQR Q
Sbjct: 318 LNGLEFAGRPQNLQLQSQRNQ 338


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 290 QHHHQDALEHQGNQ 249
           QHH   + EH  NQ
Sbjct: 105 QHHQDSSSEHASNQ 118


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 111 HSYPGRIPNPSPLTSLAYVPAGALPV 188
           ++YP        +    Y+P  ALPV
Sbjct: 45  YAYPDEASKTMAMMKGEYIPENALPV 70


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 150  LTGKGSGSDQD 118
            L GKG GSD+D
Sbjct: 1608 LRGKGHGSDKD 1618


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,281
Number of Sequences: 438
Number of extensions: 5153
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)