Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D09
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associate...    33   1.0  
BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil do...    29   9.4  
BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil do...    29   9.4  
AL833308-1|CAD89924.1|  878|Homo sapiens hypothetical protein pr...    29   9.4  
AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil do...    29   9.4  

>AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associated
           antigen BRCAA1 protein.
          Length = 1213

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 341 LDFVFNLPEARQDHRIAECRNERNVRLSERMQCERMDDGNKRIKKKEDR 487
           ++F   LPE   + +  EC N + +++ E  + E    G K IK +E+R
Sbjct: 402 IEFQMALPEKVVNKQCKECENVKEIKVKEENETEIEFCGRKEIKMEEER 450


>BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil
           domain containing 1 protein.
          Length = 1478

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +2

Query: 2   KRKESMRYQVGDKVAILRTQYGTCLKLK 85
           K KE+M+ Q+ +K AIL+++ G C +L+
Sbjct: 686 KAKEAMKAQMAEKEAILQSKEGECQQLR 713


>BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil
           domain containing 1 protein.
          Length = 1478

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +2

Query: 2   KRKESMRYQVGDKVAILRTQYGTCLKLK 85
           K KE+M+ Q+ +K AIL+++ G C +L+
Sbjct: 686 KAKEAMKAQMAEKEAILQSKEGECQQLR 713


>AL833308-1|CAD89924.1|  878|Homo sapiens hypothetical protein
           protein.
          Length = 878

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +2

Query: 2   KRKESMRYQVGDKVAILRTQYGTCLKLK 85
           K KE+M+ Q+ +K AIL+++ G C +L+
Sbjct: 86  KAKEAMKAQMAEKEAILQSKEGECQQLR 113


>AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil
           domain containing 1 protein.
          Length = 1478

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = +2

Query: 2   KRKESMRYQVGDKVAILRTQYGTCLKLK 85
           K KE+M+ Q+ +K AIL+++ G C +L+
Sbjct: 686 KAKEAMKAQMAEKEAILQSKEGECQQLR 713


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,187,918
Number of Sequences: 237096
Number of extensions: 1396336
Number of successful extensions: 2940
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)