Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D08
(566 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 324 4e-89
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 321 3e-88
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 314 3e-86
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 202 2e-52
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 3e-51
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 170 6e-43
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 136 1e-32
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 6e-32
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 133 1e-31
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 1e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 132 3e-31
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 6e-31
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 130 6e-31
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 103 1e-22
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 4e-21
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 1e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 69 4e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 65 4e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 48 7e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 42 5e-04
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 4.6
SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7) 28 4.6
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 6.1
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.1
SB_35565| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 324 bits (795), Expect = 4e-89
Identities = 147/174 (84%), Positives = 153/174 (87%)
Frame = +3
Query: 45 YKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGK 224
+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGK
Sbjct: 212 FKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGK 271
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
YVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD
Sbjct: 272 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 331
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
VVRKE+ESCDCLQGFQ KIREEYPDRIMNT+SVVPS
Sbjct: 332 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 385
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 321 bits (788), Expect = 3e-88
Identities = 147/172 (85%), Positives = 151/172 (87%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+ESCDCLQGFQ KIREEYPDRIMNT+SVVPS
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS 172
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 314 bits (771), Expect = 3e-86
Identities = 140/172 (81%), Positives = 151/172 (87%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+ESCDC+QGFQ KIREEYPDRIMNT+S+VPS
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPS 172
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 202 bits (493), Expect = 2e-52
Identities = 93/116 (80%), Positives = 97/116 (83%)
Frame = +3
Query: 219 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 398
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 399 LDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
LDVVRKE+ESCDC+QGFQ KIREEYPDRIMNT+SVVPS
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPS 117
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 198 bits (482), Expect = 3e-51
Identities = 88/92 (95%), Positives = 90/92 (97%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 326
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 170 bits (414), Expect = 6e-43
Identities = 74/118 (62%), Positives = 90/118 (76%)
Frame = +3
Query: 213 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 392
+GG+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 393 SVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
++ DV+RKE+E+CDC+QG Q KIREEYPDRI++ +SVVPS
Sbjct: 71 NIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPS 128
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 136 bits (329), Expect = 1e-32
Identities = 63/139 (45%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 212
K Y+ RE + I GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 430 KDYEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 489
Query: 213 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 392
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 490 GAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVD 549
Query: 393 SVLDVVRKESESCDCLQGF 449
VLD +RK ++ C LQGF
Sbjct: 550 LVLDRIRKLADQCTGLQGF 568
Score = 134 bits (325), Expect = 4e-32
Identities = 63/135 (46%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 405 VVRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 134 bits (323), Expect = 6e-32
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 212
K Y+ RE V I GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 415 KDYEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 474
Query: 213 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 392
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D
Sbjct: 475 GAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHID 534
Query: 393 SVLDVVRKESESCDCLQGF 449
+VLD +RK ++ C LQGF
Sbjct: 535 NVLDRIRKLADQCSGLQGF 553
Score = 112 bits (269), Expect = 2e-25
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Frame = +3
Query: 96 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEPGTM 269
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP +
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 270 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 449
D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 133 bits (321), Expect = 1e-31
Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 405 VVRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 706 RIRKLADQCTGLQGF 720
Score = 131 bits (317), Expect = 3e-31
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 54 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 227
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 228 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 407
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 408 VRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 186 IRKLADQCTGLQGF 199
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 54 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 227
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 228 VPRAILVDLEPGTMDSV 278
VPRA+ VDLEP + +
Sbjct: 574 VPRAVFVDLEPTVRECI 590
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 132 bits (320), Expect = 1e-31
Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Frame = +3
Query: 39 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEA 212
K Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 801 KDYEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSET 860
Query: 213 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 392
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 861 GAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMID 920
Query: 393 SVLDVVRKESESCDCLQGF 449
VLD +RK ++ C LQGF
Sbjct: 921 LVLDRIRKLADQCTGLQGF 939
Score = 128 bits (309), Expect = 3e-30
Identities = 60/134 (44%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +3
Query: 54 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 227
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 228 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 407
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 408 VRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 493 LRKLADGCTGLQGF 506
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 132 bits (318), Expect = 3e-31
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 54 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 227
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 228 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 407
VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 408 VRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 130 bits (315), Expect = 6e-31
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 405 VVRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 130 bits (315), Expect = 6e-31
Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 405 VVRKESESCDCLQGF 449
RK ++ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 103 bits (247), Expect = 1e-22
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 405 VVRKESESCDCLQGF 449
+RK ++ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +3
Query: 204 NEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 383
+EA+ GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 384 LVDSVLDVVRKESESCDCLQGF 449
+V+ V+D +RK ++ C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 98.3 bits (234), Expect = 4e-21
Identities = 43/128 (33%), Positives = 69/128 (53%)
Frame = +3
Query: 183 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 362
+ N ++ E GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 363 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 542
HYT G E +D LD +RK ++ C LQGF ++ +Y +
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSK 131
Query: 543 NTYSVVPS 566
++V P+
Sbjct: 132 LEFAVYPA 139
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +3
Query: 330 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXX 509
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 510 KIREEYPDRIMNTYSVVPS 566
KIREEYPDR+++++ V+PS
Sbjct: 62 KIREEYPDRLVSSFCVLPS 80
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 270 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 449
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 224
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 225 YVPRAILVDLEPGTMDSVR 281
+VPRA+ VDLEP + ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +3
Query: 276 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 449
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 68.5 bits (160), Expect = 4e-12
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Frame = +3
Query: 60 IVHIQAGQCGNQIGAKFWEIISDE------HGIDPTGAYHGDSDLQLERINVYYNEASGG 221
IV +Q GQCGNQIG + +++I ++ + ++ + E + ++ +
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 222 KYVPRAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVD 392
RA+ +D+E + S G P F Q G+GNNWA G G + +D
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSID 122
Query: 393 SVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 563
VLD+V++E E CD L GF +R+ YP+ + V P
Sbjct: 123 KVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDFYPNSFIVNNVVWP 179
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.9 bits (151), Expect = 4e-11
Identities = 29/97 (29%), Positives = 49/97 (50%)
Frame = +3
Query: 276 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQX 455
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 456 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
++ +Y + ++V P+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPA 99
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 276 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 416
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 276 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 416
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 47.6 bits (108), Expect = 7e-06
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 408 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+RKE+E CD +QGFQ ++EEYPDRI+++ SV PS
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPS 53
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 218
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 219 GKY 227
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 108 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 209
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = +3
Query: 69 IQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 248
+ GQCGNQIG + ++ + P H D L R + V
Sbjct: 6 LPVGQCGNQIGHELMTLVEKQCEGKPLS--HRDGKL-------------------RCVCV 44
Query: 249 DLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDV 407
D E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 45 DSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDA 103
Query: 408 VRKESESCDCLQG 446
+RKE E CD G
Sbjct: 104 MRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 234 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 353
RA+L+D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 295 PKGPERTESMVPGSRSTRMARGTYLP--PEA 209
PKGPER E+ + R +G YLP PEA
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLPSNPEA 868
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 364 CPLAQLLPAPDCPKTKLSGRNICP 293
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 364 CPLAQLLPAPDCPKTKLSGRNICPKGPERTESMVPGSR 251
CPL ++L AP CP ++ +CP + P R
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCPLKEMLDTTYAPSKR 209
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 364 CPLAQLLPAPDCPKTKLSGRNICP 293
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 340 APDCPKTKLSGRNICPKGPERTESMVPGSRST 245
A DCP ++ +GR +CP P +S + ++++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_20631| Best HMM Match : KH_2 (HMM E-Value=3.7)
Length = 481
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 263 AGLEVDEDGAGHVL-ASGGLIVINIDALKLQVRIAVVCTG-GVDAVLVGDDLPEFGSDLV 90
A + V+ D A V+ V+++ A+ + V A V VDAV+V ++ D
Sbjct: 229 AAVVVNVDAAAVVVNVDAAAAVVDVAAVVVDVDAAAVFVNVNVDAVIVNVEVAAVVVDCE 288
Query: 89 TALAGLNVHD 60
A+A +N HD
Sbjct: 289 VAVAVVNAHD 298
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 221
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 222 KYVPRAILVDLE 257
Y PR +L DL+
Sbjct: 83 -YTPRLLLYDLK 93
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 120 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 260
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_35565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 342 RRRTVRKQSCQGGISVRKVPNE 277
RRRT K+ CQG I V + P +
Sbjct: 481 RRRTCNKKDCQGQIHVERSPKD 502
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 352 QLLPAPDCPKTKLSGRNICPKGPERTESMVPGSRSTR 242
Q +PA KT LS R K E+T S PG+R+TR
Sbjct: 50 QEVPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,579,768
Number of Sequences: 59808
Number of extensions: 330335
Number of successful extensions: 976
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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