Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D08
(566 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 295 2e-80
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 291 2e-79
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 291 2e-79
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 290 4e-79
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 289 7e-79
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 289 7e-79
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 289 1e-78
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 288 2e-78
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 287 4e-78
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 136 7e-33
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 136 7e-33
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 134 4e-32
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 134 5e-32
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 134 5e-32
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 131 3e-31
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 131 3e-31
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 121 4e-28
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 120 5e-28
At4g37190.1 68417.m05265 expressed protein 34 0.076
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 1.6
At1g49570.1 68414.m05558 peroxidase, putative identical to perox... 29 2.9
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 3.8
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 3.8
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 23 4.5
At2g23080.2 68415.m02751 casein kinase II alpha chain, putative ... 28 5.0
At2g23080.1 68415.m02752 casein kinase II alpha chain, putative ... 28 5.0
At5g01050.1 68418.m00008 laccase family protein / diphenol oxida... 27 6.6
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 6.6
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 8.7
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 8.7
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 295 bits (723), Expect = 2e-80
Identities = 131/173 (75%), Positives = 148/173 (85%), Gaps = 1/173 (0%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 227
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 228 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 407
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 408 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
VRKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 291 bits (715), Expect = 2e-79
Identities = 130/172 (75%), Positives = 146/172 (84%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 291 bits (715), Expect = 2e-79
Identities = 132/173 (76%), Positives = 146/173 (84%), Gaps = 1/173 (0%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 227
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 228 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 407
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 408 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
VRKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 290 bits (712), Expect = 4e-79
Identities = 132/172 (76%), Positives = 144/172 (83%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 289 bits (710), Expect = 7e-79
Identities = 130/172 (75%), Positives = 144/172 (83%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 289 bits (710), Expect = 7e-79
Identities = 130/172 (75%), Positives = 144/172 (83%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 289 bits (708), Expect = 1e-78
Identities = 132/172 (76%), Positives = 144/172 (83%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+ DCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 288 bits (706), Expect = 2e-78
Identities = 129/172 (75%), Positives = 145/172 (84%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS 172
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 287 bits (704), Expect = 4e-78
Identities = 128/172 (74%), Positives = 144/172 (83%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 230
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 231 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 410
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 411 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV PS
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 136 bits (330), Expect = 7e-33
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
VRK +++C LQGF ++ +Y + +++ PS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS 174
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 136 bits (330), Expect = 7e-33
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
VRK +++C LQGF ++ +Y + +++ PS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS 174
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (324), Expect = 4e-32
Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 405 VVRKESESCDCLQGF 449
+RK +++C LQGF
Sbjct: 121 RLRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (323), Expect = 5e-32
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+RK +++C LQGF ++ +Y + ++V PS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 134 bits (323), Expect = 5e-32
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+RK +++C LQGF ++ +Y + ++V PS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 131 bits (317), Expect = 3e-31
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+RK +++C LQGF ++ +Y + ++V PS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 131 bits (317), Expect = 3e-31
Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 224
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 225 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 404
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 405 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+RK +++C LQGF ++ +Y + ++V PS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 121 bits (291), Expect = 4e-28
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Frame = +3
Query: 54 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 233
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 234 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 407
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 408 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+ +E++ D L+GF + + Y +++ TYSV P+
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN 174
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 120 bits (290), Expect = 5e-28
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Frame = +3
Query: 54 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 233
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 234 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 407
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 408 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 566
+ +E++ D L+GF + + Y +++ TYSV P+
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN 174
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.076
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 51 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 218
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 219 GKYVPRAILVDLEP--GTMDS 275
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 384 LVDSVLDVVRKESESCDCLQGF 449
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g49570.1 68414.m05558 peroxidase, putative identical to
peroxidase ATP5a [Arabidopsis thaliana]
gi|1546702|emb|CAA67341; similar to peroxidase
SWISS-PROT:P80679 from [Armoracia rusticana]
Length = 350
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 293 ERSRTNRVHGAGLEVDEDGAGHVLASGGLIVINIDALKLQVRIAVVCTGG 144
+ ++ NR G EV ED + +S L V D + L R AVV TGG
Sbjct: 111 KNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGG 160
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 343 PAPDCPKTKLSGRNICPKGPERTESMVPG-SRSTRMARGT 227
PAP P L NICP G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Frame = -2
Query: 334 DCPK-TKLSGRNICPKGPERTESMV--PG------SRSTRMARGTY--LPPE 212
DC + + S RN CP GP R +S + PG S S+R A G Y L PE
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSRKASGNYEVLGPE 331
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 272 VHGAGLEVDEDGAG-HVLASGGLIVINIDA 186
+ G G+ VD GAG H+ A ++I A
Sbjct: 176 IEGTGVFVDGPGAGKHIQAGASKVIITAPA 205
Score = 23.0 bits (47), Expect(2) = 4.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 113 PEFGSDLVTALAGLNVHDFPHFVFFIL 33
P G+D+ T + G+N D+ H V I+
Sbjct: 204 PAKGADIPTYVMGVNEQDYGHDVANII 230
>At2g23080.2 68415.m02751 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 307
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 39 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 149
KK K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At2g23080.1 68415.m02752 casein kinase II alpha chain, putative
identical to probable casein kinase II, alpha chain
[Arabidopsis thaliana] SWISS-PROT:O64817; similar to
casein kinase II, alpha chain 1 [Arabidopsis thaliana]
SWISS-PROT:Q08467
Length = 333
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 39 KKYKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPT 149
KK K++ + I CG K ++I+ DEH P+
Sbjct: 69 KKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPS 105
>At5g01050.1 68418.m00008 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 586
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -2
Query: 265 VPGSRSTRMARGTYLPPEASL**TLMRSSCKSESPWYAPVGSMPCSSEMISQNLAPIWLP 86
VP S T+ RG + A+ SS PW P +P + S + + P
Sbjct: 289 VPASPDTKPTRGLIVYEGAT-------SSSSPTKPWMPPANDIPTAHRFSSNITSLVGGP 341
Query: 85 HW 80
HW
Sbjct: 342 HW 343
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 57 EIVHIQAGQCGNQIGAKFWEIISD 128
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 99 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 248
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 72 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 164
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,410,285
Number of Sequences: 28952
Number of extensions: 227507
Number of successful extensions: 744
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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