Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D05
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 398  PSGSITIFRSMSASN 354
            PSG I+  RSMSAS+
Sbjct: 1157 PSGHISRRRSMSASS 1171


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 398  PSGSITIFRSMSASN 354
            PSG I+  RSMSAS+
Sbjct: 1157 PSGHISRRRSMSASS 1171


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 398  PSGSITIFRSMSASN 354
            PSG I+  RSMSAS+
Sbjct: 1157 PSGHISRRRSMSASS 1171


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 398  PSGSITIFRSMSASN 354
            PSG I+  RSMSAS+
Sbjct: 1157 PSGHISRRRSMSASS 1171


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 299 LTPVDSTPVSRLYCLACPGAAGSSRTGRFLSKWLS 195
           L+ +    + R    A PG + S+R   + S WL+
Sbjct: 334 LSKLGGEDLFRTMANAAPGNSASNRHSAWQSHWLN 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,128
Number of Sequences: 336
Number of extensions: 2502
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)