Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_D05
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging ... 31 0.33
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 31 0.57
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 3.1
U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical pr... 28 3.1
U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical pr... 28 3.1
U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical p... 27 9.3
U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting... 27 9.3
U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting... 27 9.3
U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting... 27 9.3
U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting... 27 9.3
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF000194-6|ABC71793.1| 385|Caenorhabditis elegans Hypothetical ... 27 9.3
AF000194-5|AAK39377.2| 616|Caenorhabditis elegans Hypothetical ... 27 9.3
>U41552-3|AAC69100.2| 303|Caenorhabditis elegans Dauer or aging
adult overexpressionprotein 3 protein.
Length = 303
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -3
Query: 464 LTSINLGALLLSQVQKQLFPCGPSGSITIFRSMSASNALYIS 339
LT IN G L ++Q+ +FPC P G + + + + +A ++S
Sbjct: 126 LTRINAGRLARGELQRTIFPCTPFGCLYLVQ-QATGDANFVS 166
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 30.7 bits (66), Expect = 0.57
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 94 DSVESTELTRESVETSRKNGFNQVGIIE 177
DSV+S E S E S+KN +N +G IE
Sbjct: 658 DSVDSGESNSSSDENSQKNRYNNIGAIE 685
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/50 (22%), Positives = 29/50 (58%)
Frame = +1
Query: 64 RLQRDNEDQSDSVESTELTRESVETSRKNGFNQVGIIETDMESQDSHLDR 213
++++DNE +V E T + E+ ++ +Q+ ++ +++SQD + +
Sbjct: 952 KIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQDEVISK 1001
>U39646-7|AAA80371.1| 623|Caenorhabditis elegans Hypothetical
protein F47B7.2a protein.
Length = 623
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 208 DRNRPVLDEPAAPGHA--RQYKRDTGVESTGVSYSGGKLALNQGKKDIYKALEAD 366
D+N P+ E + + R +K ++ + G+ YSG K +N+ DI +AD
Sbjct: 112 DKNMPLCREHSVSSYPSLRYFKYNSHNKDDGMKYSGDKYDINKLAHDIAGLAQAD 166
>U39646-6|AAK72058.1| 624|Caenorhabditis elegans Hypothetical
protein F47B7.2c protein.
Length = 624
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 208 DRNRPVLDEPAAPGHA--RQYKRDTGVESTGVSYSGGKLALNQGKKDIYKALEAD 366
D+N P+ E + + R +K ++ + G+ YSG K +N+ DI +AD
Sbjct: 112 DKNMPLCREHSVSSYPSLRYFKYNSHNKDDGMKYSGDKYDINKLAHDIAGLAQAD 166
>U39646-5|AAK72057.1| 678|Caenorhabditis elegans Hypothetical
protein F47B7.2b protein.
Length = 678
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 208 DRNRPVLDEPAAPGHA--RQYKRDTGVESTGVSYSGGKLALNQGKKDIYKALEAD 366
D+N P+ E + + R +K ++ + G+ YSG K +N+ DI +AD
Sbjct: 112 DKNMPLCREHSVSSYPSLRYFKYNSHNKDDGMKYSGDKYDINKLAHDIAGLAQAD 166
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
C14C10.5 protein.
Length = 1908
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 433 YHRCRSNYFRAVRLEALLSSDPCLLPTPCIYPFYLDSMQV 314
Y + +SNYF + L++DP L P + + SMQV
Sbjct: 1186 YEKSKSNYFLLIEQLFTLANDPTLHWRPLDMAYSMLSMQV 1225
>Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.7 protein.
Length = 596
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 175 ETDMESQDSHLDRNRPVLDEPAAPGHARQYKRDTGVESTGVSYSG 309
+ D E+QD HLD+ R + A G A ++ +TG+ + S G
Sbjct: 236 QLDGETQDRHLDKKRRISLAVTAGGRA-SHQLETGMYFSRTSNGG 279
>U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting
protein protein16, isoform k protein.
Length = 657
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 67 LQRDNEDQSDSVESTELTRESVETSRKNGFNQVGIIETDMESQD 198
L+RD + E EL++ + E +++G+++ ++E+D+ D
Sbjct: 205 LKRDANKGPVNAELDELSKRAEELRKRDGWSKYKLVESDIYKTD 248
>U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting
protein protein16, isoform c protein.
Length = 706
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 67 LQRDNEDQSDSVESTELTRESVETSRKNGFNQVGIIETDMESQD 198
L+RD + E EL++ + E +++G+++ ++E+D+ D
Sbjct: 211 LKRDANKGPVNAELDELSKRAEELRKRDGWSKYKLVESDIYKTD 254
>U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting
protein protein16, isoform a protein.
Length = 663
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 67 LQRDNEDQSDSVESTELTRESVETSRKNGFNQVGIIETDMESQD 198
L+RD + E EL++ + E +++G+++ ++E+D+ D
Sbjct: 211 LKRDANKGPVNAELDELSKRAEELRKRDGWSKYKLVESDIYKTD 254
>U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting
protein protein16, isoform j protein.
Length = 716
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 67 LQRDNEDQSDSVESTELTRESVETSRKNGFNQVGIIETDMESQD 198
L+RD + E EL++ + E +++G+++ ++E+D+ D
Sbjct: 264 LKRDANKGPVNAELDELSKRAEELRKRDGWSKYKLVESDIYKTD 307
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +2
Query: 5 EQSVDKSHILHERQEQQDRIDFNEIMKISLTVLSRQN 115
E S + + +R+E Q+ + NE +K +++ L R+N
Sbjct: 540 EASQESAASQEQREESQEIVKLNEELKENISTLQREN 576
>AF000194-6|ABC71793.1| 385|Caenorhabditis elegans Hypothetical
protein ZC328.3b protein.
Length = 385
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 340 DIYKALEADMDLKIVMLPDGPHGNNCFCTCDSNSAP 447
D Y A D DL+ M P+G + +C+S S P
Sbjct: 235 DEYAANHPDEDLRAPMSITFPNGRDVIKSCESESTP 270
>AF000194-5|AAK39377.2| 616|Caenorhabditis elegans Hypothetical
protein ZC328.3a protein.
Length = 616
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 340 DIYKALEADMDLKIVMLPDGPHGNNCFCTCDSNSAP 447
D Y A D DL+ M P+G + +C+S S P
Sbjct: 466 DEYAANHPDEDLRAPMSITFPNGRDVIKSCESESTP 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,007,364
Number of Sequences: 27780
Number of extensions: 236194
Number of successful extensions: 478
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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