Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D04
         (216 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   0.48 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   5.9  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 0.48
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 14  SVSDRSLNRITHSIYTINFVKMKVAPVLFVVLLSL 118
           +++D+SL+      +T+N  +MK  P LF VL  +
Sbjct: 49  NITDQSLDEAQARKHTLNCHRMK--PALFSVLCEI 81


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.4 bits (38), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 110 LSLMCVVQCKIYCRSSFI 163
           L  M  V  ++YC SSF+
Sbjct: 538 LIFMIFVTYQLYCWSSFL 555


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 97  VCCSSILNVCRA 132
           VCCS+I  V +A
Sbjct: 652 VCCSTIHEVSKA 663


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,508
Number of Sequences: 336
Number of extensions: 777
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2794090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)