Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D04
         (216 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            21   6.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    21   6.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/32 (21%), Positives = 19/32 (59%)
 Frame = +2

Query: 44  THSIYTINFVKMKVAPVLFVVLLSLMCVVQCK 139
           T ++YT+N +K  +   +  +++ ++   +CK
Sbjct: 747 TETVYTLNDIKRYLVHAIENLIVVIVIYDKCK 778


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 143 KSYIARHTLRIEEQQTKLVQPSFL 72
           KSYI RH   ++E  T     S L
Sbjct: 83  KSYITRHEGALQEHFTSRTARSLL 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,975
Number of Sequences: 2352
Number of extensions: 3159
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 49
effective length of database: 448,731
effective search space used:  9872082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)