Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D04
         (216 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF061324-1|AAC16058.1| 1549|Homo sapiens sulfonylurea receptor 2...    28   6.2  
AF061323-1|AAC16057.1| 1549|Homo sapiens sulfonylurea receptor 2...    28   6.2  

>AF061324-1|AAC16058.1| 1549|Homo sapiens sulfonylurea receptor 2B
           protein.
          Length = 1549

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 47  HSIYTINFVKMKVAPVLFVVLLSLMCVVQCKIYCRSSFITTNM 175
           H+I T NF K+ +A  L+ V+  +   ++   YC+S    +N+
Sbjct: 123 HNIETSNFPKLLLALFLYWVMAFITKTIKLVKYCQSGLDISNL 165


>AF061323-1|AAC16057.1| 1549|Homo sapiens sulfonylurea receptor 2A
           protein.
          Length = 1549

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 47  HSIYTINFVKMKVAPVLFVVLLSLMCVVQCKIYCRSSFITTNM 175
           H+I T NF K+ +A  L+ V+  +   ++   YC+S    +N+
Sbjct: 123 HNIETSNFPKLLLALFLYWVMAFITKTIKLVKYCQSGLDISNL 165


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,896,178
Number of Sequences: 237096
Number of extensions: 414622
Number of successful extensions: 683
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)