Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D03
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    26   0.19 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   3.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.2  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      22   4.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.5  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   7.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.6  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 464 LFTVIRKTLIIDDMPMEYVHFIRGH 390
           LFT + +  I + MPME +  +R H
Sbjct: 322 LFTTVHRICIGETMPMELIENLRNH 346


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +3

Query: 342 SRHYLSLSKILKNIDAMAANKMNVLHWHIVDDQSFPYHSEKFPELSRLGAYHP 500
           S H + LS   ++ D       + LH H V  Q  PY   + P+  +    HP
Sbjct: 52  STHLMDLSSPPEHRDLPIYQSHHHLHHHQVLYQQSPYLMYENPDEEKRYQEHP 104


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 260 VCKIEELRPSFQASYNAPYRCACHSSGRC 174
           V K+E +   + A    P  C CH+  RC
Sbjct: 459 VYKVETVGDKYMAVSGLPEPCRCHA--RC 485


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 252 LTNDFRELRINSTDIYDYPRY 314
           ++ND + L   S D+   PRY
Sbjct: 33  VSNDMQPLEARSADLVPEPRY 53


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 260 VCKIEELRPSFQASYNAPYRCACHSSGRC 174
           V K+E +   + A    P  C CH+  RC
Sbjct: 459 VYKVETVGDKYMAVSGLPEPCRCHA--RC 485


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 323 GTPAGHIQALFIVIEDTKEYRC 388
           G    H+    +++ED  EY C
Sbjct: 478 GDVISHVNISHVMVEDGGEYSC 499


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 323 GTPAGHIQALFIVIEDTKEYRC 388
           G    H+    +++ED  EY C
Sbjct: 478 GDVISHVNISHVMVEDGGEYSC 499


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 252 LTNDFRELRINSTDIYDYPRY 314
           ++ND + L   S D+   PRY
Sbjct: 33  VSNDRQSLEARSADLVPEPRY 53


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 81  QGTVQELHVELTAPCEKLP 137
           Q T  +LH+ LT+P  + P
Sbjct: 665 QHTQSQLHLHLTSPPARSP 683


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,413
Number of Sequences: 438
Number of extensions: 2417
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)