Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D02
         (102 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   1.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    19   4.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   5.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    19   5.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    18   7.8  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 3   GTEFTIHGSSIGSPTGTYNILECGG 77
           G  FT+  S+     GTY   E GG
Sbjct: 270 GRTFTLSNSNTNYNPGTYINKEAGG 294


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 5   NRIYNPRLINWV 40
           N+++ P+L+ WV
Sbjct: 96  NQVFAPQLLLWV 107


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
          adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 43 PPGRIIFSN 69
          PP RI FSN
Sbjct: 29 PPNRIDFSN 37


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
          protein.
          Length = 203

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 73 PHSRILYVPVGDPIDEP 23
          PHS   Y P   PI EP
Sbjct: 23 PHSPEPYPPRCPPIYEP 39


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 18.2 bits (35), Expect = 7.8
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -3

Query: 100 RGARALPSPPHSRILYVPVGDPIDEPWIV 14
           R  + L  P   R +YV  G      WIV
Sbjct: 262 RHRKNLKDPCRRRQMYVDFGSVGWNDWIV 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,462
Number of Sequences: 336
Number of extensions: 343
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 15
effective length of database: 117,545
effective search space used:  2115810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.3 bits)