Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_D02
         (102 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-05
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.8  

>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 927

 Score = 43.2 bits (97), Expect = 3e-05
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 1   GEPNLQSTAHQLGLPPGRIIFSNVAAKEEHVRRG 102
           GE N+++    +GL   R+IFS VA KEEHVRRG
Sbjct: 820 GESNIKAEVSSMGLSQDRVIFSPVAPKEEHVRRG 853


>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 879

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 22  TAHQLGLPPGRIIFSNVAAKEEHVRRG 102
           T H  G P  R  F+ VAA  E  R G
Sbjct: 329 TCHAEGFPGSRHTFTVVAATSEQTRNG 355


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.135    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,111,093
Number of Sequences: 59808
Number of extensions: 43236
Number of successful extensions: 89
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 16,821,457
effective HSP length: 14
effective length of database: 15,984,145
effective search space used: 303698755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)