Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C19
         (398 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0)               30   0.80 
SB_45383| Best HMM Match : HDV_ag (HMM E-Value=1.9)                    29   1.4  
SB_52620| Best HMM Match : Y_phosphatase (HMM E-Value=9.3e-06)         29   1.8  
SB_54099| Best HMM Match : Y_phosphatase (HMM E-Value=1.3)             28   2.4  
SB_50464| Best HMM Match : Y_phosphatase (HMM E-Value=1.3)             28   2.4  
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.4  
SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   2.4  
SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)               27   4.3  
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.3  
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)            27   5.6  
SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.6  
SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)            27   5.6  
SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.8  
SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.8  
SB_15844| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-23)                 26   9.8  
SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)             26   9.8  

>SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 753

 Score = 29.9 bits (64), Expect = 0.80
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 24  IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYE 167
           ++TSE  + + + VL ALV  ++  P  N+  A +   +L    N++ YE
Sbjct: 700 VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMVRLSKLRTPGNVSGYE 749


>SB_45383| Best HMM Match : HDV_ag (HMM E-Value=1.9)
          Length = 444

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +3

Query: 102 NLTVAFINYEELSPLNNINSYEQLYDSVVVGDYKAAVMKTLRLENDGXGEVINLVVNRLL 281
           NLT        L  + + N + Q YD + +   +A     +  E D  G  I    N+ L
Sbjct: 8   NLTGKLCQEVRLEGVGSGNPFAQPYDGIKLSSMRAKAADEMADEGDDAGAAIVQARNKFL 67

Query: 282 SEG-KRNIVE 308
           ++  K+N++E
Sbjct: 68  TQVLKKNMIE 77


>SB_52620| Best HMM Match : Y_phosphatase (HMM E-Value=9.3e-06)
          Length = 324

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +3

Query: 24  IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYEQLYDSVVV 191
           ++TSE  + + + VL ALV  ++  P  N+  A     +L    N++ YE  +  + V
Sbjct: 246 VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMARLSKLRTPENVSGYEAEFQRLSV 303


>SB_54099| Best HMM Match : Y_phosphatase (HMM E-Value=1.3)
          Length = 97

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 24  IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYE 167
           ++TSE  + + + VL ALV  ++  P  N+  A     +L    N++ YE
Sbjct: 43  VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMARLSKLRTPGNVSGYE 92


>SB_50464| Best HMM Match : Y_phosphatase (HMM E-Value=1.3)
          Length = 96

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 24  IETSE--MILTITVLSALVTQASLTPLSNLTVAFINYEELSPLNNINSYE 167
           ++TSE  + + + VL ALV  ++  P  N+  A     +L    N++ YE
Sbjct: 43  VQTSEQYVFIHLAVLEALVCGSTDIPADNMKAAMARLSKLRTPENVSGYE 92


>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1671

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2

Query: 38   NDFNDNGAECTGDASVPYTSK 100
            N FN N AEC      PYTSK
Sbjct: 1395 NMFNGNSAECKNKHGQPYTSK 1415


>SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 547

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 14 TTANRDQRNDFNDNGAECTG 73
          T  NRD+R DF DNG   +G
Sbjct: 16 TDKNRDERKDFKDNGKRQSG 35


>SB_55161| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.3)
          Length = 260

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
 Frame = +2

Query: 8   RETTA--NRDQRND--FN--DNGAE-CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLR 166
           +ETTA  N + RN+  F   D  AE C+G   V Y  + P+GC      A     HQLL 
Sbjct: 109 KETTACVNVNNRNNGCFRSIDMCAEMCSGGYYVYYL-RPPYGCSM-AYCAGRFSGHQLLE 166

Query: 167 TVVRQCSCRRLQGCS 211
            V R   C  + GCS
Sbjct: 167 LVTRGKRCVTMNGCS 181


>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6500

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
 Frame = +3

Query: 21   RIETSEMILTITVLSALVTQASLTPL-SNLTVAFINYEELSPLNNINSYEQ-----LYDS 182
            RI   + I   T L  ++ Q   +   SN+ VA    ++L   + + S  +     + DS
Sbjct: 2089 RISFDDQISNTTALKHMLNQTERSRGGSNIGVAIAALKQLFASDAVRSNARKVLVIMTDS 2148

Query: 183  VVVGDYKAAVMKTLRLENDGXGEVINLVV 269
               GD  AA      LENDG  +VI L +
Sbjct: 2149 QATGDLNAAKAAAKELENDGI-KVITLAL 2176


>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
          Length = 676

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = +3

Query: 93  PLSNLTVAFINYEELSPLNNINSYEQLYDSVVVGDYKAAVMKTLRLENDGXGEVINLVVN 272
           P+S +T A    + +     IN   +  D V+  +Y   +   +  E+ G GE+ +  VN
Sbjct: 130 PISGMTAALSLEKSIGCDRPINYKTESLDKVLNKEYPKGI--DVIYESIG-GEIFDTCVN 186

Query: 273 RLLSEGKRNIVEY--AYK 320
           RL ++G+  ++ +  AYK
Sbjct: 187 RLATKGRIIVIGFITAYK 204


>SB_22572| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 537

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +2

Query: 65  CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRTVVRQCSCRRLQGCS 211
           C+G   V Y  + P+GC       F+   HQLL  V +   C  + GCS
Sbjct: 395 CSGGYYVYYL-RPPYGCSMAYCAGFSG--HQLLELVTQGKRCVTMNGCS 440


>SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)
          Length = 552

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = +3

Query: 162 YEQLYDSVVVGDYKAAVMKTLRLENDGXGEVINLVVNRLLSEGKRNIVEYAYKLWNMFGT 341
           + QL + ++   Y  + +KT+R+E+D       L +  LL       ++Y  K    F +
Sbjct: 252 FRQLQEPLLTNTYHDSFIKTMRIEDDNTRTKAMLYICLLLPLAHLQALKYTMKFLAEFAS 311

Query: 342 N 344
           +
Sbjct: 312 H 312


>SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1652

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 9   EKQLRIETSEMILTITVLSALVTQASLTPLSNLT 110
           E+ LR++  +  L +  L     Q S+ P SN+T
Sbjct: 291 ERPLRVKDPDQCLCVNSLVPTTAQTSIMPTSNIT 324


>SB_17743| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 260

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +2

Query: 65  CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRTVVRQCSCRRLQGCS 211
           C+G   V Y  + P+GC      A     HQLL  V R+  C  + GC+
Sbjct: 135 CSGGYYVYYL-RPPYGCSM-AYCAGRFSGHQLLELVTRKKRCVTMNGCA 181


>SB_15844| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-23)
          Length = 343

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 100 LRGVRDACVTSALSTVIVKIISLVSI 23
           + G+ + C+TSA+S   V I+S + I
Sbjct: 85  ITGLNEVCITSAVSLKFVSIVSALHI 110


>SB_10439| Best HMM Match : Metallothio_7 (HMM E-Value=3.6)
          Length = 288

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +2

Query: 65  CTGDASVPYTSKQPHGCIY*LRRAFATQ*HQLLRTVVRQCSCRRLQGCS 211
           C+G   V Y  + P+GC      A     HQLL  V R   C  + GCS
Sbjct: 118 CSGGYYVYYL-RPPYGCSM-AYCAGRFSGHQLLELVTRGKRCVTMNGCS 164


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,715,465
Number of Sequences: 59808
Number of extensions: 177951
Number of successful extensions: 519
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)