Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C19
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   2.3  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   2.3  

>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
 Frame = +3

Query: 60   LSALVTQASLTPLSNLTVAFINY---EELSPLNNINSYEQLYDSVVVGDYKAAVMK--TL 224
            L A +  + L+ +++L  AFIN    EELS L N N    LYD  ++  Y+  V++   L
Sbjct: 1895 LLAPMRNSELSNVAHLQ-AFINKQREEELSGLENNNKVVSLYDECMLLQYQINVIRNVVL 1953

Query: 225  RLE 233
            RLE
Sbjct: 1954 RLE 1956


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
 Frame = +3

Query: 60   LSALVTQASLTPLSNLTVAFINY---EELSPLNNINSYEQLYDSVVVGDYKAAVMK--TL 224
            L A +  + L+ +++L  AFIN    EELS L N N    LYD  ++  Y+  V++   L
Sbjct: 1895 LLAPMRNSELSNVAHLQ-AFINKQREEELSGLENNNKVVSLYDECMLLQYQINVIRNVVL 1953

Query: 225  RLE 233
            RLE
Sbjct: 1954 RLE 1956


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,089,835
Number of Sequences: 53049
Number of extensions: 245367
Number of successful extensions: 549
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)