Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C19
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z68120-2|CAA92200.1| 218|Caenorhabditis elegans Hypothetical pr... 28 2.8
U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical pr... 27 3.7
U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 27 3.7
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 5.0
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 27 5.0
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 5.0
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 26 8.7
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 26 8.7
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 204 AAVMKTLRLENDGXGEVINLVVNRLLSEGKRNIV-EYAYKLWNMFGTN 344
AA + L+LE D E + ++ + EG + EYA K WN+ G++
Sbjct: 256 AARLNILQLETDNEIESTHQLITSCMPEGYQLTEWEYALKFWNINGSS 303
>Z68120-2|CAA92200.1| 218|Caenorhabditis elegans Hypothetical
protein T24C2.2 protein.
Length = 218
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVG-DYKAAVMKTLRLENDGXGEVI--NLVVNR--LLSEGKRNIVE 308
+ N NS + +++V D K A++ LRL+ DG + N + + +L E K+ VE
Sbjct: 27 VENYNSENRFERTIIVANDNKTAILLILRLKQDGVKTSVFTNYLADDEIVLGEQKKAFVE 86
Query: 309 YAYKL 323
A+K+
Sbjct: 87 GAHKV 91
>U28993-3|AAT81196.1| 635|Caenorhabditis elegans Hypothetical
protein F22D3.2b protein.
Length = 635
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 41 DFNDNGAECTGDASV-PYTSKQPHGCI 118
D +D GA CT S+ P TS P G I
Sbjct: 27 DVDDKGASCTASTSLGPSTSSSPPGII 53
>U28993-2|AAK31497.1| 720|Caenorhabditis elegans Hypothetical
protein F22D3.2a protein.
Length = 720
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 41 DFNDNGAECTGDASV-PYTSKQPHGCI 118
D +D GA CT S+ P TS P G I
Sbjct: 27 DVDDKGASCTASTSLGPSTSSSPPGII 53
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 23 NRDQR-NDFNDNGAECTGDASVPYTSKQPHGCIY*LRR 133
+R+Q+ DFND+ A T + PY S P+ +Y R+
Sbjct: 811 DREQKWFDFNDSSANPTYPPAEPYESSDPYILVYRRRK 848
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 422 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 451
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 523 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 552
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 422 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 451
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 523 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 552
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 90 TPLSNLTVAFINYEELSPLNNINSYEQLYDSVV--VGDYKAAVMKTLRLEN 236
TP+S+L ++ + + S N + SYE + +SV+ D + +RL N
Sbjct: 33 TPVSSLLLSALLNDRNSTTNTLTSYENVQNSVICNFSDINCRLAAGMRLGN 83
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 144 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 233
LNN +SY L D+ VG Y A V+ RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 26.2 bits (55), Expect = 8.7
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 12 KQLRIETSEMILTITVLSALVTQASLTPLSNLTVAFINYEE-LSPLNNINSYEQLYDSVV 188
K+ +I + +LT + +AL + ++ ++ A IN+EE LS L + + + + V
Sbjct: 304 KKTQIPYRDSVLTCLLKNALGGNSKTIMIAAISPADINFEETLSTLRFADRAKSIKTNAV 363
Query: 189 VGDYKA-AVMKTLRLEN 236
V + + ++ LR EN
Sbjct: 364 VNENQTERALRELREEN 380
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 26.2 bits (55), Expect = 8.7
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 12 KQLRIETSEMILTITVLSALVTQASLTPLSNLTVAFINYEE-LSPLNNINSYEQLYDSVV 188
K+ +I + +LT + +AL + ++ ++ A IN+EE LS L + + + + V
Sbjct: 304 KKTQIPYRDSVLTCLLKNALGGNSKTIMIAAISPADINFEETLSTLRFADRAKSIKTNAV 363
Query: 189 VGDYKA-AVMKTLRLEN 236
V + + ++ LR EN
Sbjct: 364 VNENQTERALRELREEN 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,894,582
Number of Sequences: 27780
Number of extensions: 131773
Number of successful extensions: 430
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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