Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C19
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    24   0.56 
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    24   0.56 
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    24   0.56 
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    24   0.56 
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    24   0.56 
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    24   0.56 
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    24   0.56 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    24   0.74 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   1.3  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   3.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   5.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   5.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.9  

>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  ISSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 87  LTPLSNLTVAFINYEELSPLNNINSYEQLYDSV 185
           ++ LSN    + NY   +  NN N+Y++LY ++
Sbjct: 82  VSSLSN-NYNYSNYNNYNNNNNYNNYKKLYYNI 113


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 179 QCSCRRLQGCSNE 217
           QCSC +  GCS E
Sbjct: 84  QCSCNKCIGCSAE 96


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 71  GDASVPYTSKQPHGC 115
           G++ V  T++ PHGC
Sbjct: 267 GESEVFDTTRYPHGC 281


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +3

Query: 147 NNINSYEQLYDSVV 188
           NN N+Y++LY +++
Sbjct: 344 NNYNNYKKLYYNII 357


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -1

Query: 155 DVIEWRKLFVVN 120
           +V++W+K+F +N
Sbjct: 104 EVLDWKKIFDIN 115


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 65  CTGDASVPYTSKQPH 109
           C G   +PYT +Q H
Sbjct: 787 CAGHVRLPYTFEQFH 801


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 65  CTGDASVPYTSKQPH 109
           C G   +PYT +Q H
Sbjct: 825 CAGHVRLPYTFEQFH 839


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,916
Number of Sequences: 438
Number of extensions: 1737
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)