Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C16
(587 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55210.1 68418.m06882 expressed protein similar to unknown pr... 30 1.3
At2g05645.1 68415.m00604 hypothetical protein 30 1.3
At4g34220.1 68417.m04862 leucine-rich repeat transmembrane prote... 29 1.7
At1g09090.2 68414.m01015 respiratory burst oxidase protein B (Rb... 29 1.7
At1g09090.1 68414.m01014 respiratory burst oxidase protein B (Rb... 29 1.7
At5g43190.1 68418.m05276 F-box family protein (FBX6) contains si... 28 4.0
At1g48690.1 68414.m05449 auxin-responsive GH3 family protein sim... 28 4.0
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 28 4.0
At5g10710.2 68418.m01241 expressed protein 28 5.3
At5g10710.1 68418.m01240 expressed protein 28 5.3
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 28 5.3
At1g72800.1 68414.m08416 nuM1-related contains similarity with n... 28 5.3
At1g50940.1 68414.m05727 electron transfer flavoprotein alpha su... 28 5.3
At4g29200.1 68417.m04177 hypothetical protein 27 7.0
At2g34210.1 68415.m04186 KOW domain-containing transcription fac... 27 7.0
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 27 7.0
At1g50730.1 68414.m05705 expressed protein 27 7.0
At5g22850.1 68418.m02671 aspartyl protease family protein contai... 27 9.3
At3g01200.1 68416.m00026 expressed protein contains Pfam domain ... 27 9.3
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 27 9.3
>At5g55210.1 68418.m06882 expressed protein similar to unknown
protein (pir||T04913)
Length = 168
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 305 INSTLVRTTSSAARSRCTAL-SNRDRGLKTYWKKVSTQLEQVSRASRVGG 451
+ S L RT+S + TA+ S R R K W +VST V RAS+ G
Sbjct: 4 VGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNG 53
>At2g05645.1 68415.m00604 hypothetical protein
Length = 204
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 449 HQLSMLLKPVPVVSKPFSNMFLVHG 375
H+ +LL P P++S P S+MF+ HG
Sbjct: 130 HRPFVLLMPRPLLSSPHSHMFVEHG 154
>At4g34220.1 68417.m04862 leucine-rich repeat transmembrane protein
kinase, putative protein kinase TMKL1, Arabidopsis
thaliana, PID:E353150
Length = 757
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = -1
Query: 584 VDISIDGKTIPVLTGVTMTNIWRGKPPRVPRGNRSLCGKPRRLLYHQLSMLLKPVPVVSK 405
VD+S + T P+ + +++ N + GN+ LCGKP ++L S L P P +S+
Sbjct: 249 VDLSFNNLTGPIPSSLSLLN----QKAESFSGNQELCGKPLKILCSIPSTLSNP-PNISE 303
Query: 404 PFS 396
S
Sbjct: 304 TTS 306
>At1g09090.2 68414.m01015 respiratory burst oxidase protein B
(RbohB) / NADPH oxidase identical to respiratory burst
oxidase protein B from Arabidopsis thaliana [gi:3242783]
Length = 843
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 8 LNALYLKRWSPLWMNMTWIS--RMHFTWTRLRCKRRSLIWSTLRVCGVLITSLSRCLSML 181
++ +L+ W +W+ WIS FTW L+ KR++ ++ + C + + L
Sbjct: 287 ISYFFLENWKRIWVLTLWISICITLFTWKFLQYKRKT-VFEVMGYCVTVAKGSAETLKFN 345
Query: 182 CQIRLLTQSFVYLLVPNTIAW 244
+ LL + NTI W
Sbjct: 346 MALILLP------VCRNTITW 360
>At1g09090.1 68414.m01014 respiratory burst oxidase protein B
(RbohB) / NADPH oxidase identical to respiratory burst
oxidase protein B from Arabidopsis thaliana [gi:3242783]
Length = 622
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 8 LNALYLKRWSPLWMNMTWIS--RMHFTWTRLRCKRRSLIWSTLRVCGVLITSLSRCLSML 181
++ +L+ W +W+ WIS FTW L+ KR++ ++ + C + + L
Sbjct: 287 ISYFFLENWKRIWVLTLWISICITLFTWKFLQYKRKT-VFEVMGYCVTVAKGSAETLKFN 345
Query: 182 CQIRLLTQSFVYLLVPNTIAW 244
+ LL + NTI W
Sbjct: 346 MALILLP------VCRNTITW 360
>At5g43190.1 68418.m05276 F-box family protein (FBX6) contains
similarity to unusual floral organs (UFO) GI:4376159
from [Arabidopsis thaliana]
Length = 403
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 218 LLVPNTIAWAAS*ASMTNALTCSKSIASSINSTLVRTTSSAARS 349
L PN I+W + +LTC+ S+ SS N L + S ++ S
Sbjct: 112 LFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVS 155
>At1g48690.1 68414.m05449 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 190
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 428 KPVPVVSKPFSNMFLVHGLCSIT 360
K PV +K F NM +H LCS T
Sbjct: 99 KIFPVNNKYFENMIFIHALCSST 121
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 587 IVDISIDGKTIPVLTGVTMTNIWRGKPPR 501
+V+ +DG + P L G+ T + G PPR
Sbjct: 67 VVNFPVDGASDPFLVGLYYTKVKLGTPPR 95
>At5g10710.2 68418.m01241 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 327 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 148
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 147 K 145
K
Sbjct: 202 K 202
>At5g10710.1 68418.m01240 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 327 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 148
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 147 K 145
K
Sbjct: 202 K 202
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 218 NIRTTASTALSDITSIDTLKGW 153
NIRTT T +S I +I+ + GW
Sbjct: 109 NIRTTVGTIISVIVNIEGVSGW 130
>At1g72800.1 68414.m08416 nuM1-related contains similarity with nuM1
GI:1279563 from [Medicago sativa]
Length = 335
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -3
Query: 534 DDEHLERQTAEGSER*QKPVRKAKATLIPP-TLDALETCS---SCVETFFQYVFSPRSLF 367
DD +++ + + S ++PV K A+ P T D+L + + ++ F F P SLF
Sbjct: 109 DDSYMDTSSEDESSSAEEPVNKPAASAAKPATKDSLFSAGFKPAAKDSLFSAGFKPDSLF 168
Query: 366 DNAVHLERAADDVVLTS 316
+ E AA D + ++
Sbjct: 169 --SAGFEPAAKDSLFSA 183
>At1g50940.1 68414.m05727 electron transfer flavoprotein alpha
subunit family protein contains Pfam profile: PF00766
electron transfer flavoprotein, alpha subunit
Length = 363
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +2
Query: 89 RLRCKRRSLIWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMT 268
R K + + + R + ITSLSRC+S L +L + + P T++ + S+
Sbjct: 8 RALTKNKFVASNAPRSISISITSLSRCISTL----ILAEHESGTIKPQTVSTVVAANSLG 63
Query: 269 NALTCSKSIASSINSTLVRTTSSAA 343
+ + S +A S S+L S AA
Sbjct: 64 ESSSISLLLAGS-GSSLQEAASQAA 87
>At4g29200.1 68417.m04177 hypothetical protein
Length = 457
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 116 IWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMTNALTCSKSI 295
I+ L C VL L CL L + + + F+++++ NT+ A N+++C+ S+
Sbjct: 399 IYCDLTCCTVL---LCLCLKALMEFKSMHFIFLFMVLGNTVCCNALIFEFLNSISCNCSM 455
>At2g34210.1 68415.m04186 KOW domain-containing transcription factor
family protein
Length = 990
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 187 DKAVDAVVRIFIGPKYDCMGRLMSINDKRLDMLEIDSFVYKLDTGKNNIVRSSL 348
D V V+I +GP GRL+ + DK L +E+++ K+ TGK + R ++
Sbjct: 683 DHLVGTYVKIRLGPFKGYSGRLVEVKDK-LVRVELEA---KIVTGKLHFERKAI 732
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -1
Query: 515 GKPPRVPRGNRSLCGKP--RRLLYH 447
GKPP GN SLCGK + YH
Sbjct: 186 GKPPAYTDGNCSLCGKKIFDEMFYH 210
>At1g50730.1 68414.m05705 expressed protein
Length = 1013
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +2
Query: 107 RSLIWSTLRVCGVLITSLSRCLSMLCQIRLLTQSFVYLLVPNTIAWAAS*ASMTNALTCS 286
RS W+TLRV + ++ LS L Q L S ++ N + + + ++C+
Sbjct: 788 RSSSWATLRVKVKIFCAIMSLLSTLSQDNLPYHSANPEIIGNELLFFGDSSYKQELVSCT 847
Query: 287 KSIASSINSTLVRTTSSAAR 346
+ + S + + + +S +R
Sbjct: 848 QLVLSELLDAIEQESSQISR 867
>At5g22850.1 68418.m02671 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 493
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 587 IVDISIDGKTIPVLTGVTMTNIWRGKPPR 501
++D +DG P + G+ T + G PPR
Sbjct: 64 VIDFPVDGTFDPFVVGLYYTKLRLGTPPR 92
>At3g01200.1 68416.m00026 expressed protein contains Pfam domain
PF03618: Domain of unknown function (DUF299)
Length = 377
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 244 GRLMSINDKRLDMLEIDSFVYKLDTG--KNNIVRSSLEMHGVIE--QRPWTKNILEKGFD 411
GR+ ++ND +E F K D G N+ ++ + + GV + P + I +KG+
Sbjct: 202 GRVKTLNDAYFKRIEAIEFTIKQDDGTLPENLSKADIVLVGVSRTGKTPLSTYIAQKGYK 261
Query: 412 TTGTGF 429
F
Sbjct: 262 VANVPF 267
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 587 IVDISIDGKTIPVLTGVTMTNIWRGKPP 504
+VD + G + P L G+ T + G PP
Sbjct: 83 VVDFPVQGSSDPYLVGLYFTKVKLGSPP 110
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,176,886
Number of Sequences: 28952
Number of extensions: 241525
Number of successful extensions: 746
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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