Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C15
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.99 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.2  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 373 TEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFK 492
           T  ++     +     S   YP+   +T V Q TEP+ ++
Sbjct: 468 TSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQTEPSIYQ 507


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 246 CLILLKDLQSVLRSFRKLDRHLRHFL 169
           CL     L  V+    KLD  L+H L
Sbjct: 97  CLFYQNKLIEVISKLHKLDNKLKHML 122


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 269 VALTFTAAV*YF*KTYSLFFV 207
           V + F A+  Y  KTYSLF V
Sbjct: 160 VTIIFFASYQYGTKTYSLFIV 180


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 269 VALTFTAAV*YF*KTYSLFFV 207
           V + F A+  Y  KTYSLF V
Sbjct: 160 VTIIFFASYQYGTKTYSLFIV 180


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 207 NEEQTVSLSEVSDSSGKSQGDGPGQAMASG 296
           ++EQ +S     D+ G   G G G     G
Sbjct: 509 SQEQIISWRSSDDAKGGGGGSGSGNNQPPG 538


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = +1

Query: 472 TEPAAFKQYFSTWRDV 519
           T P  + + F+ W+D+
Sbjct: 435 TNPKQYMEIFARWKDI 450


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,481
Number of Sequences: 336
Number of extensions: 2661
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)