Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C15
(542 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 52 3e-07
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 49 2e-06
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 37 0.009
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 29 2.4
08_01_0531 - 4604556-4604582,4604829-4604921,4605381-4605572,460... 29 3.2
05_01_0120 - 828834-831143 29 3.2
05_04_0331 + 20317482-20318174,20318518-20318685,20318773-203188... 28 5.5
05_03_0596 - 16005622-16006122 28 5.5
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 28 5.5
08_01_1012 - 10238964-10239062,10239107-10239175,10239202-10239264 27 7.3
06_03_0455 + 20978658-20978677,20979104-20979608 27 7.3
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 27 7.3
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003... 27 9.7
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 27 9.7
01_06_1412 - 37140654-37141088,37141549-37142214 27 9.7
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +1
Query: 292 REQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQG 471
RE L + Y+LD S IYVW+G+++ +E+ A + A++ L N P H+ R+++G
Sbjct: 333 RELLDSTKCYLLDCGS-EIYVWMGRETPLEERKRAGSAAEELLREVNRPK-SHIVRLMEG 390
Query: 472 TEPAAFKQYFSTW 510
E F+ FS W
Sbjct: 391 FETVIFRSKFSKW 403
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +1
Query: 301 LKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEP 480
L+ + +++D S ++++W+G+ + +E+ A ++ ++ +N P VTRV+QG E
Sbjct: 280 LENNKCFLVDCGS-DLFIWVGRLTQVEERKAASAAVEEFIATQNRPKTTRVTRVIQGYEN 338
Query: 481 AAFKQYFSTW 510
FK F +W
Sbjct: 339 HTFKSKFESW 348
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +1
Query: 292 REQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEA----MTKAQQTLSAKNYPSWVHVTR 459
++ L ++ +LDT G ++VW+G+ KEK +A A+ + ++ V + +
Sbjct: 678 QDDLLTEDMMVLDT-HGEVFVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYK 736
Query: 460 VLQGTEPAAFKQYFS 504
V++G EP F+ YFS
Sbjct: 737 VVEGNEPCFFRTYFS 751
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 343 NIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYF 501
+I+ WIGK S++ E A K + + + H R LQG E F YF
Sbjct: 68 DIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQH--RELQGYESDKFLSYF 118
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +1
Query: 292 REQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLS----AKNYPSWVHVTR 459
++ L ++ +ILD S +I+VW+G+Q K + +A+ ++ + +N S +
Sbjct: 645 QDDLMTEDVFILDCHS-DIFVWVGQQVDVKVRLQALDIGEKFVKLDFLMENLSSDTPIFV 703
Query: 460 VLQGTEPAAFKQYFSTW 510
+++G+EP F ++F TW
Sbjct: 704 IMEGSEPTFFTRFF-TW 719
>02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 262 KATGLARPWRREQLKPQESYILDTVSG-NIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYP 438
+A GL R++ L ESY+ DT+ + +++I K+ +E EA + +S ++P
Sbjct: 1251 QACGLIYMTRKQNLPALESYMKDTLEPFHAFIFINKKLSELADYEASSFRSSVIS--HFP 1308
Query: 439 SWVHVTR 459
V ++R
Sbjct: 1309 ELVKLSR 1315
>08_01_0531 -
4604556-4604582,4604829-4604921,4605381-4605572,
4605800-4606390
Length = 300
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 135 ALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGK-SQGDGPGQ 281
A G G R +E GG+ E +E++ V + E D + +G+G G+
Sbjct: 108 AAGGGGRGGGGDEEMGGEGDEEEEDEDEEVVVEEEEDEDDEDEEGEGEGE 157
>05_01_0120 - 828834-831143
Length = 769
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 301 LKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEP 480
L + ++I+ +S +IYVW+G + + + +A A Q + + H+ V +G+E
Sbjct: 324 LDSRGAFIVHVLS-SIYVWVGMKCDQVMEKDARAAAFQVVRYEKVQG--HIKVVREGSEV 380
Query: 481 AAFKQYFST 507
F FS+
Sbjct: 381 PEFWDAFSS 389
>05_04_0331 +
20317482-20318174,20318518-20318685,20318773-20318895,
20319094-20319165,20321217-20321431,20321521-20321593,
20322092-20322568,20322970-20323077,20323184-20323192,
20323193-20323552
Length = 765
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 168 EESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGDGPGQAMAS 293
E+++G D+++ N+E+ + + D+SGK G+ A+ S
Sbjct: 531 EDASGNDEKSAGSNQEEEDAEVKGKDASGKPAGEDDDNALIS 572
>05_03_0596 - 16005622-16006122
Length = 166
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 267 RLDFYRCCLILLKDLQSVLRSFRKLDRHLRHFLPALYPWC 148
R+ RCC + ++ R KL+R L +LYP C
Sbjct: 35 RMILVRCCRTQRRTVKVKRRPINKLERMLEDHRTSLYPGC 74
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 111 VDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKS--QGDGPGQA 284
V+ +K + + D E A G+D+ + +E + + SD G S + + P +
Sbjct: 142 VEERKNYGKSEADDDDSDEESDASGEDEYDD--DEDMIDKQDSSDDDGDSSDEEETPSKI 199
Query: 285 MASGTVETTGVVH 323
+ +GT + +G VH
Sbjct: 200 LCAGTGKRSGYVH 212
>08_01_1012 - 10238964-10239062,10239107-10239175,10239202-10239264
Length = 76
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 366 LPDPYVDVPTYSIQDVRLLWFQLFPTPWPGQARRLDFYRCCLILLKDLQ 220
L P + P + + L+W +F P + RRL+ RCC L LQ
Sbjct: 3 LQPPLIGGPIF-VPIFGLVWMFVFYPPSLARLRRLNSSRCCYERLHQLQ 50
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 507 GREVLFEGSRLSALQYSGYVDP 442
GRE++ +G+R++ L S Y DP
Sbjct: 144 GREMVLDGTRITKLCVSSYADP 165
>01_01_0484 -
3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 93 DQYSNEVDTQKFFTALGSGTRDIVPEESAGGDD 191
+ +SN VD ++ FT++ + RD+ + G D
Sbjct: 628 ENFSNSVDDREVFTSIAASVRDVCKQNPDRGVD 660
>12_02_0362 +
17998110-17998345,17998877-17998958,18000309-18000392,
18000600-18000734,18001395-18001570,18001654-18001805,
18003730-18004575,18004961-18005301
Length = 683
Score = 27.1 bits (57), Expect = 9.7
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 3 TKNVEKLKAISMANQIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTR---DIVPEE 173
T+N + L + +++IRD + NG + N++D K + + D+ +
Sbjct: 408 TEN-KNLPSHGNSSEIRDVNRNGNDGTNVTSLMVNKIDKDKVKAQMEKQRKLKGDVARKV 466
Query: 174 SAGGDDQAFERNEEQTVSLSEVSDSSGKSQ 263
DD ER E + L+ V D+ K +
Sbjct: 467 EVIDDDDDLERQLEHDIELA-VEDNKIKQE 495
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 369 LLPDPYVDVPTYSIQDVRLLWFQLFPTPWP 280
L PDP +P + LL+F L P P P
Sbjct: 64 LTPDPSATLPALGLASGDLLYFTLSPLPSP 93
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +3
Query: 117 TQKFFTALGSGTRD---IVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGDGPGQAM 287
+ F ++ +RD +VP E GG+ Q ++ + L + + + + P +
Sbjct: 28 SSSFSSSSSMASRDQETVVPGEDGGGEIQEDHKSGMTCLPLLSMLEEGNSKRHEHPVKEE 87
Query: 288 ASGTVETTGVVHPG 329
+ GVV PG
Sbjct: 88 IMSSAHAAGVVEPG 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,477,785
Number of Sequences: 37544
Number of extensions: 324425
Number of successful extensions: 1059
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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