Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C15
(542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 6e-16
SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83) 35 0.037
SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 33 0.15
SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_12474| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_43580| Best HMM Match : DNA_primase_S (HMM E-Value=5.9) 29 1.9
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10) 29 1.9
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.2
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 25 3.5
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 25 3.8
SB_9419| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_5785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_38076| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05) 28 4.3
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 28 4.3
SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_49835| Best HMM Match : PKD_channel (HMM E-Value=1.2e-28) 28 5.7
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 28 5.7
SB_24015| Best HMM Match : I-set (HMM E-Value=2.7e-21) 28 5.7
SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016) 27 7.5
SB_33863| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_28096| Best HMM Match : Gelsolin (HMM E-Value=3.3) 27 7.5
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 27 7.5
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5) 27 9.9
SB_32178| Best HMM Match : TBC (HMM E-Value=3.2e-06) 27 9.9
SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_13892| Best HMM Match : Protamine_P2 (HMM E-Value=2) 27 9.9
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 27 9.9
SB_21948| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 27 9.9
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 81.0 bits (191), Expect = 6e-16
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = +1
Query: 277 ARPWRREQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVT 456
A+P ++ L + +ILD S ++VW+GK T+ EKS AM + K YP+W VT
Sbjct: 164 AKPLKKSNLDTNDCFILDCGSSGVFVWVGKGCTKNEKSAAMKNGIDFIEKKGYPNWTQVT 223
Query: 457 RVLQGTEPAAFKQYFSTWRD 516
RV++G E FKQ+FS W D
Sbjct: 224 RVVEGGETPIFKQFFSGWTD 243
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 12 VEKLKAISMANQIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPEESAGGDD 191
VE++K I +A +IRD++ GR +V IID+ ++ KFF ALGS R + E+ G
Sbjct: 80 VERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESKFFDALGS--RGEIAEDL--GTT 135
Query: 192 QAFERNEEQTVSLSEVSDSSGK 257
++ R + SLS +SD+SG+
Sbjct: 136 RSL-RKPARAPSLSTMSDASGE 156
>SB_4901| Best HMM Match : Gelsolin (HMM E-Value=0.83)
Length = 60
Score = 35.1 bits (77), Expect = 0.037
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 319 YILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQY 498
++ DT + YVW+G ++ E+ +AMT A L ++P ++ VT V +G E F
Sbjct: 2 FLFDT-GCHCYVWVGAGASIDERGKAMTYAHNYLGQTDHP-FLPVTVVAEGKETNDFNSA 59
Query: 499 F 501
F
Sbjct: 60 F 60
>SB_19295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 289 RREQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLS 423
+R LK + YI D+ + YV++GK ++ E+ AMT A Q L+
Sbjct: 46 KRSLLKEDDVYIFDS-GRHCYVYVGKAASIDERRNAMTYAHQPLT 89
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 328 DTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFST 507
D + +++ WIGK ST+ E A K + N H R +QG E FK YF +
Sbjct: 517 DELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQH--REVQGFESKLFKSYFKS 574
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 328 DTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRV 462
D + +++ WIGK ST+ E T A +T+ YP V V V
Sbjct: 906 DELKYDVHFWIGKDSTQDEYG---TAAYKTVELDIYPKSVKVEEV 947
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 292 REQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKN 432
R L ++ +ILD N+Y+W+G + + EK M + + S +N
Sbjct: 618 RSSLCSEDVFILDK-GLNLYLWVGVKCDKDEKFRGMQEILKIKSERN 663
>SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 360 DPYVDVPTYSIQDVRLLWFQLFPTPWPGQARRLDFYRCCLILLKDLQSVL 211
D Y DV Y +R + Q P PWP A LD +L +L ++L
Sbjct: 101 DKYKDVALYLRTLIRQAFMQSHPLPWPPTADELDINVANEVLPSELTNLL 150
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 30.7 bits (66), Expect = 0.80
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 18 KLKAISMANQIRDQDHNGRGRVEIIDQYSNEVD---TQKFFTALGSGTRDIVPEESAGGD 188
+L S + R E YS++ D T + TA G RD++PE++ G+
Sbjct: 692 RLNGASCIGSVEPSTSQQSARPECASHYSDDEDLPVTARTLTA-GPCNRDLIPEQTRPGN 750
Query: 189 DQAFERNEEQTVSLSE 236
+A R +E+ S+ E
Sbjct: 751 KRA-RREDEEKQSVGE 765
>SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +3
Query: 45 QIRDQDHNGRGRVEIIDQYSNEVD-TQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQT 221
++ +D RGR + N + T G+ T+ P +S G D + +NE Q
Sbjct: 384 KVPQRDDGPRGREDFKGPRGNNMGRTPNQKREKGAATK---PRKSPGSDTRRHTKNEPQQ 440
Query: 222 VSLS-EVSDSSGKSQGDGPGQAMASGTVETTGV-VHPGYC 335
V S + D G GD G+ T E G + PG C
Sbjct: 441 VDSSCDRKDFIGPRNGDA-GRKPNESTREDKGADIEPGRC 479
>SB_12474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 360 DPYVDVPTYSIQDVRLLWFQLFPTPWPGQARRLDFYRCCLILLKDLQSVL 211
D Y DV Y +R + Q P PWP A LD +L +L + L
Sbjct: 309 DKYKDVALYLRTLIRQAFMQSHPLPWPPTADELDINVANEVLPSELTNFL 358
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +3
Query: 54 DQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLS 233
D+D +G G EI + T + SG+ D E S ++Q N+++T +
Sbjct: 186 DEDDDGDGDQEI----KGPIKTAEESDDNSSGSDDESEESSEEEENQESAVNKQETATQD 241
Query: 234 EVSDSSGKSQGD 269
E SDS S+G+
Sbjct: 242 ESSDSEESSEGN 253
>SB_43580| Best HMM Match : DNA_primase_S (HMM E-Value=5.9)
Length = 252
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 360 DPYVDVPTYSIQDVRLLWFQLFPTPWPGQARRLDFYRCCLILLKDLQSVL 211
D Y DV Y +R + Q P PWP A LD +L +L + L
Sbjct: 179 DKYKDVALYLRTLIRQAFIQSHPLPWPPTADDLDINVANEVLPSELTNFL 228
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +1
Query: 337 SGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 516
S +I W S + +T + Q L++++ +W HVT + + STWR
Sbjct: 292 SHHISTWCHAVSRHVTSTHGVT-SHQYLASRHISTWRHVTSHQHLVSRSVTSYHISTWRH 350
Query: 517 VGMSHSRL 540
V SH L
Sbjct: 351 V-TSHQHL 357
>SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10)
Length = 517
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +3
Query: 201 ERNEEQTVSL-----SEVSDSSGKSQGDGPGQAMASGTVETTGVVHP 326
E E QTV SEV+ S+G SQGD +A S TV T+ V+P
Sbjct: 155 EETEAQTVQPPIFIPSEVTSSAG-SQGDPSKEARTSQTVSTSNSVNP 200
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 415 FAGLLSWLQTFPFQSTASR 359
FAG++SW TFPF SR
Sbjct: 141 FAGVVSWASTFPFDVIKSR 159
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 25.4 bits (53), Expect(2) = 3.5
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 409 QQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 516
Q +A P+W + R+ + E F++ F W D
Sbjct: 1665 QDNKTADTRPAWTLLARLHEKAETILFREKFLDWPD 1700
Score = 21.4 bits (43), Expect(2) = 3.5
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 301 LKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQ 414
L +E + D S +YVW G+QS ++ +Q
Sbjct: 1603 LDTKEVLVFDFGS-ELYVWNGQQSLSGQRKTVFALGKQ 1639
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 25.4 bits (53), Expect(2) = 3.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 409 QQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 516
Q +A P+W + R+ + E F++ F W D
Sbjct: 110 QDNKTADTRPAWTLLARLHEKAETILFREKFLDWPD 145
Score = 21.4 bits (43), Expect(2) = 3.8
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 301 LKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQ 414
L +E + D S +YVW G+QS ++ +Q
Sbjct: 48 LDTKEVLVFDFGS-ELYVWNGQQSLSGQRKTVFALGKQ 84
>SB_9419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 54 DQDHNGRGRVEIIDQYSNEVDTQKFF--TALGSGTRDIVPEESAGGD 188
D D NG V D N VD+ + + +G+G D V +S G D
Sbjct: 87 DSDSNGNDYVSDNDDDDNSVDSDTYGNDSVIGNGDDDSVDSDSNGND 133
>SB_5785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 28.3 bits (60), Expect = 4.3
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 264 LDFYRCCLILLKDLQSVLRSFRKLDRHLRHFLPALYPWCLIRGL*RTFGCPPRLNIDQ*F 85
L F R + ++ + R+ R LDR +RHF+ + L + R FGC R F
Sbjct: 5 LHFSRAIPYFSRVIRHLSRAIRHLDRDIRHFVDVM---GLFSPVARFFGCAIRFLDSAIF 61
Query: 84 QHDLYR 67
DL R
Sbjct: 62 FIDLQR 67
>SB_38076| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05)
Length = 577
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 142 PRAVKNFWVSTSFEY*SIISTRPLPLW 62
P+ +FWV++ EY +I P P+W
Sbjct: 550 PQPSSHFWVTSRLEYLLMILETPKPMW 576
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 282 PGQARRLDFYRCCLILLKDLQSVLRSFRKLD 190
PG+ RL+ RC + ++++SV R RKL+
Sbjct: 93 PGRIERLEIRRCIGAVKEEIESVSRDERKLE 123
>SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 114 DTQKFFTALGSGTRDIVPEESAGGDDQAFERNE--EQTVSLSEVSDSSG 254
+ Q+++ +GSGT++I+ E + DD+A + SDS+G
Sbjct: 476 EQQEYYAYIGSGTKNIILVEESLIDDKALREDSGYHSDTPSQSASDSTG 524
>SB_49835| Best HMM Match : PKD_channel (HMM E-Value=1.2e-28)
Length = 1075
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 312 LWFQLFPTPWPGQARRLDFYRCCLILL 232
LWF +F P + RL CCL LL
Sbjct: 109 LWFSIFMRPARSRFTRLQRVSCCLTLL 135
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 156 DIVPEESAGGDDQAFERNE-EQTVSLSEVSDSSGKSQGDGP 275
++VP E G DDQ F R++ E VS + + + +++ P
Sbjct: 94 EVVPGEELGSDDQVFPRHDNENLVSKTITNKENDQNESCSP 134
>SB_24015| Best HMM Match : I-set (HMM E-Value=2.7e-21)
Length = 609
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 219 TVSLSEVSDSSGKSQGDGPGQAMASGTVETTGVVHPGYCKWEHLRMDRE 365
T+++ +++ ++ GDG ASG + +G HP K E R D +
Sbjct: 542 TLAVVAITEKKHEASGDGQSDGSASGQSDESGSGHPH--KRERTRRDEQ 588
>SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016)
Length = 606
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGDGPGQ 281
S+++ Q++ ++ S + + + S D Q+ R+ + ++ S +SSG QG+G G
Sbjct: 273 SDDIQHQRYSSSTSSLSAN---QSSMTSDSQSSTRDYQVGITESYQGNSSGNLQGNGNGN 329
Query: 282 AMASGTVETTG 314
+G G
Sbjct: 330 PHGNGNDNLQG 340
>SB_33863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +3
Query: 60 DHNGRGRVEIIDQYSNEVDTQKFFTALGSG---TRDIVPEESAGGDDQAFERNEEQTVSL 230
+ G+G VE++DQ S E KF+ T D + + G ++A + S
Sbjct: 311 EKQGQGMVELLDQLSPETAPHKFYVGFRYATPLTEDAIEQMERDGIERAIAFTQYPQYSC 370
Query: 231 SEVSDS 248
S S
Sbjct: 371 STTGSS 376
>SB_28096| Best HMM Match : Gelsolin (HMM E-Value=3.3)
Length = 196
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 307 PQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAA 486
P E+Y D G IYVWIG + TE + A Q+ + S + + +G EP
Sbjct: 131 PFENYAED---GIIYVWIGGKVTEADAEHAKELGQEI-----WDSGYTIQIINEGEEPEN 182
Query: 487 F 489
F
Sbjct: 183 F 183
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 NIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVT-RVLQGTEPAAFKQYFST 507
+++ WIG+ ST+ E T A +T+ Y + V V R + E FK YF +
Sbjct: 568 DLHFWIGRGSTQDEYG---TAAYKTVELDTYLNDVPVQHREIMNHESDMFKTYFKS 620
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 312 LWFQLFPTPWPGQARRLDFYRCCLILL 232
LWF +F P + R+ CCL LL
Sbjct: 1824 LWFSVFTRPAKSRFTRVQRLSCCLTLL 1850
>SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5)
Length = 237
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 322 ILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSA-KNYPSWVHVTRVLQGTEPAAFKQY 498
+ D + N ++W+G S ++ K +A+ A ++L A ++Y + + VLQ + A K
Sbjct: 66 VRDVLKDNDFIWLGSFSYDQMK-QAIGSAYKSLRANRSYKRFRRFSSVLQNEQLDACKCK 124
Query: 499 F 501
F
Sbjct: 125 F 125
>SB_32178| Best HMM Match : TBC (HMM E-Value=3.2e-06)
Length = 759
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 78 RVEIID--QYSNEVDTQKFFTALGSGTRDIVPEESAGG 185
R +ID Y N+ D + + AL G+ ++P AGG
Sbjct: 318 RDSVIDLTHYYNDEDDNRVYAALADGSIAVLPNAHAGG 355
>SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 322 ILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSA-KNYPSWVHVTRVLQGTEPAAFKQY 498
+ D + N ++W+G S ++ K +A+ A ++L A ++Y + + VLQ + A K
Sbjct: 66 VRDVLKDNDFIWLGSFSYDQMK-QAIGSAYKSLRANRSYKRFRRFSSVLQNEQLDACKCK 124
Query: 499 F 501
F
Sbjct: 125 F 125
>SB_13892| Best HMM Match : Protamine_P2 (HMM E-Value=2)
Length = 228
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 165 PEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGD 269
P++ GDD E+++E VS ++ S GD
Sbjct: 62 PDDDEDGDDNELEKSDESDVSETDPSKDQYDDDGD 96
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 250 AVKVKATGLARPWR----REQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQT 417
A+ KA + +P R E+L Q +++DT Y+W+GK + E+ + A
Sbjct: 878 ALHTKAGVIPQPHRYHLSAEKLSRQGVFLMDTGHA-FYIWVGKDTPEEIIQQLFNVANYN 936
Query: 418 LSAKN 432
A+N
Sbjct: 937 NIAEN 941
>SB_21948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 303 QLFPTPWPGQARRLDFYRCCLILLKDLQSVLRSFRKLDRHLRHFLPALYPWCLIRGL 133
Q+F PW L F + L L +F ++ H H++ L+P IRGL
Sbjct: 2 QIFSDPWVLSVVELPFVN------RHLPFALTTFFEIGLHPEHYIRGLHPEHCIRGL 52
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/39 (25%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 343 NIYVWIGKQS--TEKEKSEAMTKAQQTLSAKNYPSWVHV 453
+IY+W+G+++ +E ++++ K ++ +S K WV +
Sbjct: 366 HIYMWVGEEAKKSEVDETQEFIKVREYVSGKVRVPWVKI 404
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,347,441
Number of Sequences: 59808
Number of extensions: 352612
Number of successful extensions: 1051
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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