Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C15
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 81 4e-16
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 36 0.014
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 36 0.014
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 30 1.2
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 2.2
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 28 5.0
Z46933-2|CAA87035.1| 101|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z22181-13|CAA80184.3| 632|Caenorhabditis elegans Hypothetical p... 27 6.6
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 27 6.6
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 27 6.6
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 27 6.6
Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41542-11|AAK39151.1| 67|Caenorhabditis elegans Hypothetical p... 27 8.7
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 27 8.7
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 27 8.7
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 27 8.7
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 27 8.7
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 27 8.7
DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin p... 27 8.7
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 27 8.7
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 27 8.7
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 27 8.7
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 27 8.7
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/91 (39%), Positives = 53/91 (58%)
Frame = +1
Query: 244 TAAVKVKATGLARPWRREQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLS 423
+ A KV R+EQL P++++ILD ++G I+VWIG + T +E+S+A+ Q L
Sbjct: 260 SGAAKVSMVSQGENIRKEQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLK 319
Query: 424 AKNYPSWVHVTRVLQGTEPAAFKQYFSTWRD 516
+ P W VTRVL+ E F Q+F W D
Sbjct: 320 QHHLPRWTQVTRVLESAESTQFTQWFRDWVD 350
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +1
Query: 292 REQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYP--SWVHVTRVL 465
+E L + ILD ++ +IYVW+G + EK EA+ A+ L P + +
Sbjct: 381 QEDLDGDDVMILDALN-SIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKTAIDTIF 439
Query: 466 QGTEPAAFKQYFSTWRD 516
QG EP FK++F +W D
Sbjct: 440 QGKEPPTFKKFFPSWDD 456
Score = 36.7 bits (81), Expect = 0.011
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +3
Query: 12 VEKLKAISMANQIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPEESAGGDD 191
+E++K ++ A I D + G +V I+D E D F + G + DD
Sbjct: 183 LERIKGMARAKNIADHERMGIPKVHILDDV--EWDNDSTFWSYFGGVSSVRKVSKGKDDD 240
Query: 192 QAFERNEEQTVSLSEVSDSSGKSQ 263
+ + + ++L +VSD+SG ++
Sbjct: 241 DNYWKRLTEQITLWKVSDASGAAK 264
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 289 RREQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQ 468
+++ L + ++LD+ S +I++WIGK++ K + + P + V R +
Sbjct: 766 KQDMLGSKGVFVLDSNS-DIFLWIGKKANRLLKMAGQKLVVELHQMIDRPDYAQVYRETE 824
Query: 469 GTEPAAFKQYFSTWRDV 519
G E F+ F+ W ++
Sbjct: 825 GEESMMFRSKFAGWDEI 841
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 289 RREQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQ 468
+++ L + ++LD+ S +I++WIGK++ K + + P + V R +
Sbjct: 766 KQDMLGSKGVFVLDSNS-DIFLWIGKKANRLLKMAGQKLVVELHQMIDRPDYAQVYRETE 824
Query: 469 GTEPAAFKQYFSTWRDV 519
G E F+ F+ W ++
Sbjct: 825 GEESMMFRSKFAGWDEI 841
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 31.1 bits (67), Expect = 0.54
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Frame = +1
Query: 295 EQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLS--AKN------------ 432
E +KP E I D S IYVW G+ S + + A A+Q + KN
Sbjct: 362 EIMKPSEVLIFDFGS-EIYVWTGRYSNKVSSAYAQEYAKQLMKKPVKNGKFILGDAESID 420
Query: 433 ---YPSWVHVTRVLQGTEPAAFKQYFSTW 510
P W ++ QG FK FS W
Sbjct: 421 QDGRPEWTLSRKIHQGVLDTLFKAKFSDW 449
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 DIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQ----GDGPGQAMASGTVETT 311
++ P ES G D+ F R + +TVSL+ D + Q GDG A+ E T
Sbjct: 841 EVAPAESTGEDEDIFRR-DRRTVSLTGTGDQNAPIQVIFVGDGDENPDANADQERT 895
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 DIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQ----GDGPGQAMASGTVETT 311
++ P ES G D+ F R + +TVSL+ D + Q GDG A+ E T
Sbjct: 841 EVAPAESTGEDEDIFRR-DRRTVSLTGTGDQNAPIQVIFVGDGDENPDANADQERT 895
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 156 DIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQ----GDGPGQAMASGTVETT 311
++ P ES G D+ F R + +TVSL+ D + Q GDG A+ E T
Sbjct: 841 EVAPAESTGEDEDIFRR-DRRTVSLTGTGDQNAPIQVIFVGDGDENPDANADQERT 895
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 349 YVWIGKQSTEKEKSEA-MTKAQQTLSAKNYPSWVHVTRVLQ 468
Y + GK T KE M K + K+YP WV T V+Q
Sbjct: 643 YHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQ 683
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 132 TALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGDGPGQAMASGTVETT 311
T GS I E + G ++ E TVS S VS SG + G++ SG+ +T
Sbjct: 1081 TVSGSTGSTITGESTVSGSTESTV-TAESTVSGSSVSTVSGNTGSTITGESTVSGSTGST 1139
Query: 312 G 314
G
Sbjct: 1140 G 1140
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 3 TKNVEKLKAISMAN--QIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPEES 176
T N++ + A++ N DQ + R V++ + +V + S T+ + EE
Sbjct: 368 TNNLQLVLALTKLNFALTTDQKIDERAHVQLAVDATQQVLEKYTLLTFDSATKGQL-EEV 426
Query: 177 AGGDDQAFERNEEQTVSL 230
+D+ FER+EE+ V++
Sbjct: 427 QVENDEVFERSEEEVVTI 444
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 207 NEEQTVSLSEVSDSSGKSQGDGPGQAMASGTVETTG 314
+E T S S VSD+SG S GP + + T+G
Sbjct: 419 SEPSTTSGSTVSDTSGPSTTSGPSTTLGTTQSTTSG 454
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 289 RREQLKPQESYILDTVSGNIYVWIGKQSTEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQ 468
+ E L Q + + + VWIG Q T+K + +T A L+A Y + +
Sbjct: 86 KNEALYIQTALLAQIPQSSGSVWIGIQRTQKCLKQKLTAACSALTAFEY-----TDKSVT 140
Query: 469 GTEPAAFKQY 498
GT+ F++Y
Sbjct: 141 GTDGFVFQKY 150
>Z46933-2|CAA87035.1| 101|Caenorhabditis elegans Hypothetical
protein F34H10.2 protein.
Length = 101
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 387 LFLFSRLLPDPYVDVPTYSIQDVRLLWFQLFPTP 286
++ +R +P+ Y TYS + V W +L+P P
Sbjct: 40 MYWVNRAMPNKYRKYRTYSRRSVSQRWKRLYPLP 73
>Z22181-13|CAA80184.3| 632|Caenorhabditis elegans Hypothetical
protein ZK632.7 protein.
Length = 632
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 265 ATGLARPWRREQLKPQESYILDTVS---GNIYVWIGKQSTEKEKSEAM 399
ATG A WR++ + + +I DT S N+ ++ ST K +E M
Sbjct: 443 ATGRANGWRKDLYQQLKKFIEDTYSMDLRNVIGFLHNNSTRKTINEIM 490
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 18 KLKAISMANQIRDQDHNGRGRVEIIDQYSNEVDTQKFFTALGSGTRDIVPE 170
KLK S A +I +++ + V+II+Q+S QK F+ L I+PE
Sbjct: 2 KLKINSEAPKIDNENDAFQKIVDIINQFSASEIAQKKFSFLSPRILSIMPE 52
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 243 DSSGKSQGDGPGQAMASGTVETTG 314
+SSG++ G+G G+A G+ E +G
Sbjct: 93 ESSGEASGEGSGEASGEGSGEASG 116
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 207 NEEQTVSLSEVSDSSGKSQGDGPGQAMASGTVETTG 314
+E Q S E ++SG+ G+G G+A + E++G
Sbjct: 357 SECQETSGEESGEASGEQSGEGSGEASGEASGESSG 392
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 243 DSSGKSQGDGPGQAMASGTVETTG 314
+SSG++ G+G G+A G+ E +G
Sbjct: 93 ESSGEASGEGSGEASGEGSGEASG 116
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 207 NEEQTVSLSEVSDSSGKSQGDGPGQAMASGTVETTG 314
+E Q S E ++SG+ G+G G+A + E++G
Sbjct: 357 SECQETSGEESGEASGEQSGEGSGEASGEASGESSG 392
>Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical
protein F36A2.4 protein.
Length = 618
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 384 FLFSRLLPDPYVD--VPTYSIQDVRLLWFQLF-PTP 286
F+F+RL PDP D V + S VRL W F P P
Sbjct: 382 FMFARLPPDPPSDCQVVSTSAYSVRLAWAPPFSPDP 417
>Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical
protein R06C7.4 protein.
Length = 292
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 153 RDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGDGPGQAMASGTVETTG 314
RD+ E D + E + E + S ++SG++ G+ G+A + ET+G
Sbjct: 27 RDVSASEDEFSGDSSGEISGESSGEAS--GEASGEASGEASGEASGESSGETSG 78
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 108 EVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKS 260
E + LG D+V + D +A E EE+ + L + S SS +S
Sbjct: 645 EAGNHEELVRLGGRYFDLVKAQQFKADPEATEEFEEEEIDLDDTSRSSRRS 695
>U41542-11|AAK39151.1| 67|Caenorhabditis elegans Hypothetical
protein C07A12.2 protein.
Length = 67
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 373 TEKEKSEAMTKAQQTLSAKNYPSWVHVTRVLQGTEPAAFKQYFSTW 510
TE + MT+ Q+ + P + + Q P A QYF+ W
Sbjct: 22 TEARNAPPMTRIQEVFRSLMAPEEIRGKKYYQQYVPNAENQYFTEW 67
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 136 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 195
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 196 TARRE-TTKMVDSNHPDY 212
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 344 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 403
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 404 TARRE-TTKMVDSNHPDY 420
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 153 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 212
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 213 TARRE-TTKMVDSNHPDY 229
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 136 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 195
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 196 TARRE-TTKMVDSNHPDY 212
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 153 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 212
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 213 TARRE-TTKMVDSNHPDY 229
>DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin
proteoglycan-3 protein.
Length = 292
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 153 RDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQGDGPGQAMASGTVETTG 314
RD+ E D + E + E + S ++SG++ G+ G+A + ET+G
Sbjct: 27 RDVSASEDEFSGDSSGEISGESSGEAS--GEASGEASGEASGEASGESSGETSG 78
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 108 EVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKS 260
E + LG D+V + D +A E EE+ + L + S SS +S
Sbjct: 645 EAGNHEELVRLGGRYFDLVKAQQFKADPEATEEFEEEEIDLDDTSRSSRRS 695
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 323 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 382
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 383 TARRE-TTKMVDSNHPDY 399
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 344 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 403
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 404 TARRE-TTKMVDSNHPDY 420
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 102 SNEVDTQKFFTALGSGTRDIVPEESAGGDDQAFERNEEQTVSLSEVSDSSGKSQG-DGPG 278
+N+ D+QK T G+G R+ + + E+ ++ + L ++ +G G G
Sbjct: 153 TNKYDSQKGMTGFGTGRRETTKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFG 212
Query: 279 QAMASGTVETTGVVHPGY 332
A T + HP Y
Sbjct: 213 TARRE-TTKMVDSNHPDY 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,656,469
Number of Sequences: 27780
Number of extensions: 260370
Number of successful extensions: 871
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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