Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C14
(247 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g42960.1 68416.m04512 alcohol dehydrogenase (ATA1) identical ... 33 0.026
At1g63380.1 68414.m07166 short-chain dehydrogenase/reductase (SD... 31 0.081
At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein] reduct... 30 0.19
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 0.57
At1g07220.1 68414.m00768 expressed protein 28 0.75
At3g55290.2 68416.m06141 short-chain dehydrogenase/reductase (SD... 28 0.99
At3g55290.1 68416.m06140 short-chain dehydrogenase/reductase (SD... 28 0.99
At3g51680.1 68416.m05667 short-chain dehydrogenase/reductase (SD... 28 0.99
At1g62610.2 68414.m07064 short-chain dehydrogenase/reductase (SD... 28 0.99
At1g62610.1 68414.m07063 short-chain dehydrogenase/reductase (SD... 28 0.99
At5g28050.1 68418.m03379 cytidine/deoxycytidylate deaminase fami... 27 2.3
At4g23570.2 68417.m03396 phosphatase-related low similarity to p... 26 4.0
At4g23570.1 68417.m03395 phosphatase-related low similarity to p... 26 4.0
At5g37030.1 68418.m04441 tRNA-splicing endonuclease positive eff... 25 5.3
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 25 5.3
At3g26770.1 68416.m03348 short-chain dehydrogenase/reductase (SD... 25 5.3
At3g25020.1 68416.m03127 disease resistance family protein conta... 25 5.3
At5g10050.1 68418.m01164 short-chain dehydrogenase/reductase (SD... 25 7.0
At5g65205.1 68418.m08201 short-chain dehydrogenase/reductase (SD... 25 9.2
At5g01120.1 68418.m00016 hypothetical protein contains Pfam prof... 25 9.2
At4g34120.1 68417.m04840 CBS domain-containing protein contains ... 25 9.2
At3g49030.1 68416.m05356 F-box family protein contains F-box dom... 25 9.2
At2g29670.1 68415.m03606 expressed protein 25 9.2
>At3g42960.1 68416.m04512 alcohol dehydrogenase (ATA1) identical to
alcohol dehydrogenase (ATA1) GI:2501781 from
[Arabidopsis thaliana]
Length = 272
Score = 33.1 bits (72), Expect = 0.026
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Frame = +3
Query: 15 AAYEQVLDKYRRLDGVINNAAVLSVDERSFKKM-ID-IN--FTATVNSTLKGLD--CMGI 176
AA E + + RLD + NNA +S++E S M +D +N + VN L G+ +
Sbjct: 71 AAVELAMRRKGRLDVMFNNAG-MSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIKHAAKAM 129
Query: 177 DKGGRGGVVVNMSS 218
KGGRGG ++ SS
Sbjct: 130 IKGGRGGSIICTSS 143
>At1g63380.1 68414.m07166 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 287
Score = 31.5 bits (68), Expect = 0.081
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = +3
Query: 3 DQLAAAYEQVLDKYRRLDGVINNAAV-------LSVDERSFKKMIDINFTATVNSTLKGL 161
D + A ++ + + ++D +INNA + L + E + K+ N T + +
Sbjct: 90 DTIRKAVKEAWETFGKIDVLINNAGIRGNVKSSLDLSEEEWDKVFRTNLTGSW--LISKY 147
Query: 162 DCMGIDKGGRGGVVVNMSSLLALN 233
C+ + RGG V+N+SS+ L+
Sbjct: 148 VCLLMRDAERGGSVINVSSISGLH 171
>At1g24360.1 68414.m03072 3-oxoacyl-[acyl-carrier protein]
reductase, chloroplast / 3-ketoacyl-acyl carrier protein
reductase identical to 3-oxoacyl-[acyl-carrier protein]
reductase SP:P33207 from [Arabidopsis thaliana]
Length = 319
Score = 30.3 bits (65), Expect = 0.19
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 15 AAYEQVLDKYRRLDGVINNAAV------LSVDERSFKKMIDINFTATVNSTLKGLDCMGI 176
A + LDK+ +D V+NNA + + + + + ++I +N T T + M
Sbjct: 143 AMMKTALDKWGTIDVVVNNAGITRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMK 202
Query: 177 DKGGRGGVVVNMSSLLAL 230
K GR ++N+SS++ L
Sbjct: 203 KKRGR---IINISSVVGL 217
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 28.7 bits (61), Expect = 0.57
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 3 DQLAAAYEQVLDKYRRLDGVINNAAVLSVDERSFKKMID 119
DQL+ E ++DK +L +I A L V E + K I+
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKIE 685
>At1g07220.1 68414.m00768 expressed protein
Length = 507
Score = 28.3 bits (60), Expect = 0.75
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 41 ISKARWSHKQRGGFECRRALFQEND*YKFYGDG 139
I + W+ + +GGFE + Q N YK Y +G
Sbjct: 297 IMRQDWAEEAKGGFEQSKLSNQCNHRYKIYAEG 329
>At3g55290.2 68416.m06141 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 279
Score = 27.9 bits (59), Expect = 0.99
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 18 AYEQVLDKYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNSTLKGL------DCMGID 179
A + D + ++D +INNA + + +S + + + + LKG CM +
Sbjct: 90 AVREAWDIFGKIDALINNAGIRG-NVKSSLDLSEDEWDNVFKTNLKGPWLVSKHVCMLMR 148
Query: 180 KGGRGGVVVNMSSLLAL 230
RGG V+N+SS+ +
Sbjct: 149 DAKRGGSVINISSIAGI 165
>At3g55290.1 68416.m06140 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 280
Score = 27.9 bits (59), Expect = 0.99
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 18 AYEQVLDKYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNSTLKGL------DCMGID 179
A + D + ++D +INNA + + +S + + + + LKG CM +
Sbjct: 91 AVREAWDIFGKIDALINNAGIRG-NVKSSLDLSEDEWDNVFKTNLKGPWLVSKHVCMLMR 149
Query: 180 KGGRGGVVVNMSSLLAL 230
RGG V+N+SS+ +
Sbjct: 150 DAKRGGSVINISSIAGI 166
>At3g51680.1 68416.m05667 short-chain dehydrogenase/reductase (SDR)
family protein similar to short-chain alcohol
dehydrogenase GI:1877480 from [Tripsacum dactyloides]
Length = 303
Score = 27.9 bits (59), Expect = 0.99
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 39 KYRRLDGVINNAAVLSVDERSFKKMIDIN---FTATVNSTLKGLDCMGIDKGGR 191
+Y RLD + NNA VL D++ K ++D + F + ++G+ +G+ G R
Sbjct: 110 RYGRLDILFNNAGVLG-DQKKHKSILDFDADEFDHVMRVNVRGVG-LGMKHGAR 161
>At1g62610.2 68414.m07064 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 276
Score = 27.9 bits (59), Expect = 0.99
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Frame = +3
Query: 3 DQLAAAYEQVLDKYRRLDGVINNAAV-------LSVDERSFKKMIDINFTATVNSTLKGL 161
D + A ++ + + +D +INNA + L + + + K+ N T + +
Sbjct: 81 DTIRKAVKEAWEIFGTIDVLINNAGIRGNVKSSLDLSKEEWDKVFRTNLTGSW--LISKY 138
Query: 162 DCMGIDKGGRGGVVVNMSSLLALN 233
C+ + RGG V+N+SS+ L+
Sbjct: 139 VCLLMRDAKRGGSVINVSSISGLH 162
>At1g62610.1 68414.m07063 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 277
Score = 27.9 bits (59), Expect = 0.99
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Frame = +3
Query: 3 DQLAAAYEQVLDKYRRLDGVINNAAV-------LSVDERSFKKMIDINFTATVNSTLKGL 161
D + A ++ + + +D +INNA + L + + + K+ N T + +
Sbjct: 82 DTIRKAVKEAWEIFGTIDVLINNAGIRGNVKSSLDLSKEEWDKVFRTNLTGSW--LISKY 139
Query: 162 DCMGIDKGGRGGVVVNMSSLLALN 233
C+ + RGG V+N+SS+ L+
Sbjct: 140 VCLLMRDAKRGGSVINVSSISGLH 163
>At5g28050.1 68418.m03379 cytidine/deoxycytidylate deaminase family
protein similar to SP|O34598 Guanine deaminase (EC
3.5.4.3) (Guanase) (Guanine aminase) (Guanine
aminohydrolase) (GAH) (GDEase) {Bacillus subtilis};
contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 185
Score = 26.6 bits (56), Expect = 2.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 39 KYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNSTLKGLDCMGIDKGGRGGVVVNMSS 218
K DG I+ A+ S +++ T V KG+DC D G G V+V+ +
Sbjct: 5 KVEAKDGTISVASAFSGHQQAVHDSDHKFLTQAVEEAYKGVDCG--DGGPFGAVIVHNNE 62
Query: 219 LLA 227
++A
Sbjct: 63 VVA 65
>At4g23570.2 68417.m03396 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
domain, PF04969: CS domain
Length = 350
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 33 LDKYRRLDGVINNAAVLSVDERSFKKMID-INFTAT 137
L++YR + A ++ E FKK+ID NF T
Sbjct: 83 LEEYRTAKTALEKGASITPSESKFKKLIDECNFLIT 118
>At4g23570.1 68417.m03395 phosphatase-related low similarity to
phosphoprotein phosphatase [Mus musculus] GI:567040;
contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
domain, PF04969: CS domain
Length = 350
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 33 LDKYRRLDGVINNAAVLSVDERSFKKMID-INFTAT 137
L++YR + A ++ E FKK+ID NF T
Sbjct: 83 LEEYRTAKTALEKGASITPSESKFKKLIDECNFLIT 118
>At5g37030.1 68418.m04441 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 638
Score = 25.4 bits (53), Expect = 5.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 6 QLAAAYEQVLDKYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNSTLKG 158
Q+ A E++ DKY L G + V SVD + DI +TV S G
Sbjct: 520 QVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEE-DIIIISTVRSNSNG 569
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 25.4 bits (53), Expect = 5.3
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 144 STLKGLDCMGIDKGGR 191
ST++G+DC+G+ + GR
Sbjct: 1208 STIRGVDCIGVIQDGR 1223
>At3g26770.1 68416.m03348 short-chain dehydrogenase/reductase (SDR)
family protein similar to sex determination protein
tasselseed 2 SP:P50160 from [Zea mays]
Length = 306
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 9 LAAAYEQVLDKYRRLDGVINNAAVL 83
+A A E +++Y +LD + NNA ++
Sbjct: 104 IAGAVEMTVERYGKLDVMYNNAGIV 128
>At3g25020.1 68416.m03127 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 890
Score = 25.4 bits (53), Expect = 5.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 57 GVINNAAVLSVDERSFKKMIDINFTATVNSTLKGLDCMGIDKGGRGGVVVNMSSLLALNP 236
G++NN VLS+ F + +F+ S L LD + G V N+ L L+
Sbjct: 120 GMLNNLEVLSLSSSGFLAQVPFSFSNL--SMLSALDLSKNELTGSLSFVRNLRKLRVLDV 177
Query: 237 S 239
S
Sbjct: 178 S 178
>At5g10050.1 68418.m01164 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 279
Score = 25.0 bits (52), Expect = 7.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 27 QVLDKYRRLDGVINNAAVLSV 89
+V+DK+ ++D ++NNA V V
Sbjct: 73 EVIDKFGKIDVLVNNAGVQCV 93
>At5g65205.1 68418.m08201 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 285
Score = 24.6 bits (51), Expect = 9.2
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 27 QVLDKYRRLDGVINNAAVLSVDERSFKKM--IDINFTATVNSTLKGLDCMGIDKGG-RGG 197
+V+DK+ ++D ++NNA V + + + +D F V +++ + + G
Sbjct: 74 KVIDKFGQIDVLVNNAGVQCIGPLAEIPISAMDYTFNTNVLGSMRMTQAVVPHMASKKKG 133
Query: 198 VVVNMSSLLALNP 236
+VN+ S+ + P
Sbjct: 134 KIVNIGSISIMAP 146
>At5g01120.1 68418.m00016 hypothetical protein contains Pfam profile
PF05056: Protein of unknown function (DUF674)
Length = 510
Score = 24.6 bits (51), Expect = 9.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 146 TIYRRRKIYINHFLERALVDTQNRRVVYD 60
T YR +HF E L + +R+VYD
Sbjct: 365 TYYRFVSFSADHFREYRLSENSGKRLVYD 393
>At4g34120.1 68417.m04840 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 238
Score = 24.6 bits (51), Expect = 9.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 30 VLDKYRRLDGVINNAAVLSVDERSFKKMIDINFTATVNSTLK 155
V+D L GV+++ +L++D S + D N V+ST K
Sbjct: 115 VIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 156
>At3g49030.1 68416.m05356 F-box family protein contains F-box domain
Pfam:PF00646
Length = 443
Score = 24.6 bits (51), Expect = 9.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 165 CMGIDKGGRGGVVVNMSSLLALN 233
C+G GG+GG V+N SL LN
Sbjct: 230 CIG---GGKGGYVINAPSLKYLN 249
>At2g29670.1 68415.m03606 expressed protein
Length = 536
Score = 24.6 bits (51), Expect = 9.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 127 KFISIIFLKERSSTLKTAALFMTPSSLRYLSKTCSYAAASWS 2
+F+S F+ +R L +ALF TPS+ + K+C +S S
Sbjct: 49 RFLSCRFVTQR---LNRSALFGTPSTKLHRPKSCELWKSSSS 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,897,849
Number of Sequences: 28952
Number of extensions: 81340
Number of successful extensions: 176
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 12,070,560
effective HSP length: 60
effective length of database: 10,333,440
effective search space used: 217002240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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