Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C13
         (563 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.3  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   5.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.1  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 137 IYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIV 235
           I+S VCG   +T    C +Y      HS  T V
Sbjct: 342 IHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFV 374


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 305 NGKTYANKCSLECTQKIIPSL 367
           NG    NKC  +C  ++ PS+
Sbjct: 110 NGDVTVNKCEGKCNSQVQPSV 130


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 287 APVC-GSNGKTYANKCSLEC 343
           A VC G+NG T A+   LEC
Sbjct: 159 ATVCRGANGATAASDACLEC 178


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 287 APVC-GSNGKTYANKCSLEC 343
           A VC G+NG T A+   LEC
Sbjct: 159 ATVCRGANGATAASDACLEC 178


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 193 LLRKGQDTQQYDNREKHRMRGGH 261
           LL++ Q  QQ+ + + H+ +G H
Sbjct: 637 LLQQQQQQQQHQHHQAHQHQGQH 659


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +2

Query: 311 KTYANKCSLECTQKIIPSLKMEHDGECQAAKLASLHPCICTREKDPV 451
           KT       +   +++ +L  +  G+C    L  L P    +++DPV
Sbjct: 336 KTAIRASKKQFFDRMLQALHDDETGQCIRKVLYRLQPSRTAQDRDPV 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,245
Number of Sequences: 2352
Number of extensions: 15784
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)