Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C13
         (563 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   7e-04
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   3.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   3.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.9  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.6  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   8.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 34.7 bits (76), Expect = 7e-04
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 272 CTLEYAPVCGSNGKTYANKCSL 337
           C   + PVC SNGK YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 128 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKN 241
           C + + PVC S+GK Y N CE +  +   HS  ++ K+
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTKS 145



 Score = 31.5 bits (68), Expect = 0.006
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +2

Query: 386 ECQAAKLASLHPCICTRE----KDPVCGSDGVTYSNLCLLKCAS 505
           EC+ +  +++  C+C R+      PVC S+G  Y+N C L  A+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAA 135


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 344 CIPVNICWRKFFR*SHRRGHIPRYSSRGCPP 252
           C+  +I W KF +    R   P Y   G  P
Sbjct: 41  CVGDDIAWMKFDKEGRLRAINPEYGFFGVAP 71


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 128 CGKIYSPVCGSDGKTYENPCEFYCEKDKT 214
           C   Y      DG +Y N  E  C +D++
Sbjct: 230 CHSRYEDSRHEDGNSYRNDGERSCSRDRS 258


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 444 SFSRVHIHGCKL 409
           S   +H+HGCK+
Sbjct: 93  SLHELHVHGCKV 104


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 131 RKYITAVAELLPSILAQRRSEEYRVYSFCV 42
           RK  T    ++ S   Q++SEE  +   CV
Sbjct: 795 RKTATTTQPVISSRKEQKKSEEKNINDHCV 824


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 117 GGGRAVTEYISAAAIRRIPSLFILCLNINGTNLEF 13
           G G  V  ++S  ++R   +LF++ L I+   + F
Sbjct: 69  GNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMF 103


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = +2

Query: 263 PCYCTLEYAPVCGSNGKTYANKCSLE 340
           PCYCT E   +  +  +       L+
Sbjct: 1   PCYCTCEKCKITANRQQVMRQNMKLK 26


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 114 RRYVFAEKSIVPSAGQM 164
           RR +FA + ++ SAG +
Sbjct: 308 RRIIFARREVILSAGSV 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,961
Number of Sequences: 438
Number of extensions: 3865
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)