Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C12
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 35 0.030
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 35 0.030
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 33 0.12
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 31 0.49
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.0
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.0
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.6
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.6
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 3.5
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 28 4.6
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 27 8.0
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 238 CP-VTPEFNPVCGSDNQTYSNPGRLTCAQAC 149
CP T EF VCGSD +TYSN RL A AC
Sbjct: 465 CPSCTDEFKEVCGSDGKTYSNECRLQNA-AC 494
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 238 CP-VTPEFNPVCGSDNQTYSNPGRLTCAQAC 149
CP T EF VCGSD +TYSN RL A AC
Sbjct: 473 CPSCTDEFKEVCGSDGKTYSNECRLQNA-AC 502
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQ-TYSNPGRLTCAQACGVNVSLS 128
++E C C FNPVC D++ T+ +P CA G+ S
Sbjct: 441 ALETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGAS 486
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 32.7 bits (71), Expect = 0.16
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSN 179
S E+C T P E+NPVC QT++N
Sbjct: 115 SQEKCSCTAPCPTEWNPVCDKKGQTHAN 142
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -2
Query: 265 PSVEECMRTCPVTPEFNPVC---GSDNQTYSNPGRLTCAQ 155
P E TC PE +PVC G TYSN CAQ
Sbjct: 16 PYRREPNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQ 55
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 238 CPVTPEFNPVCGSDNQTYSNPGRLTCAQ 155
C PVCG+DN TY+N L C Q
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 259 VEECMRTCPVTPEFNPVCGSDNQTYSN 179
V+EC CP E++PVC S+ Q N
Sbjct: 865 VKECNNACP--KEYSPVCASNGQNIVN 889
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSN 179
S E C C T + +P+C SD TY N
Sbjct: 582 SKEACQMPC--TDDKHPICASDFSTYEN 607
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
S+ + ++C P+ P C TY+ P + +C+
Sbjct: 21 SIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCS 55
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
S+ + ++C P+ P C TY+ P + +C+
Sbjct: 21 SIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCS 55
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
S+ + ++C P+ P C TY+ P + +C+
Sbjct: 21 SIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCS 55
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
S+ + ++C P+ P C TY+ P + +C+
Sbjct: 21 SIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCS 55
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
S E ++C P P C TY+ P + +C+
Sbjct: 23 STREKRQSCGCAPRVQPSCSCQQTTYAQPPQYSCS 57
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 241 TCPVTPEFNPVCGSDNQTYSNPGRLTCAQACGVNV 137
T P N V SDN TYS+ T QAC N+
Sbjct: 298 TMPTDQNVNSVITSDNSTYSDVH--TAPQACNKNI 330
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
++ + ++C P P C TY+ P + +C+
Sbjct: 21 TIRDKRQSCGCAPRVQPSCSCQRTTYTQPQQYSCS 55
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -2
Query: 262 SVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCA 158
++ + ++C P P C TY+ P + +C+
Sbjct: 21 TIRDKRQSCGCAPRVQPSCSCQRTTYTQPQQYSCS 55
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -1
Query: 182 QPGETY--LCASLWSQCKLKQTSAVPTCHSCDELILIR 75
QPG TY C ++W K + S++ TC +E + R
Sbjct: 146 QPGCTYDVQCEAVWPGSKCRMDSSIGTCRCPEETHVAR 183
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = -2
Query: 268 SPSVEECMRTCPVTPEFNPVCGSDNQTYSNPGRLTCAQAC 149
+P+ ++C +C T + C Q S P C AC
Sbjct: 111 APACQQCQNSCQQTQQCQQQCTPQCQQPSTPQCQQCQSAC 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,514,343
Number of Sequences: 27780
Number of extensions: 172336
Number of successful extensions: 346
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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