BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C11
(536 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 23 4.9
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 23 8.6
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.4 bits (48), Expect = 4.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 78 YKMKLLLLICAVTMICGVLAKNKKTDDQKVKIAVYYESL 194
YKMKL ++ V MI GV + K +I++ E L
Sbjct: 532 YKMKLSIIFGVVHMIFGVCMSVVNHNFFKKRISIVLEFL 570
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 22.6 bits (46), Expect = 8.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -2
Query: 226 CVVMNFLLSGQRDS*YTAILTF*SSVFLFFARTPQIMVTAHINNNSFI 83
CVV+ FLL + F S + + + ++VT + + N FI
Sbjct: 315 CVVIVFLLCNLPAMMINIVEAFYSLIIEYMVKVSNLLVTINSSVNFFI 362
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,298
Number of Sequences: 2352
Number of extensions: 10271
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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