Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C11
         (536 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021136-1|AAH21136.1|  250|Homo sapiens interferon, gamma-induc...    84   3e-16
AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon induci...    84   3e-16
AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.         84   3e-16
BC031020-1|AAH31020.1|  250|Homo sapiens interferon, gamma-induc...    83   5e-16
J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducibl...    73   9e-13
AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens ...    58   1e-08
EF471359-1|ABO86192.1|  270|Homo sapiens MHC class I antigen pro...    33   0.49 
AC007192-3|AAD22672.1|  101|Homo sapiens INIP_HUMAN [AA 4- 104] ...    33   0.49 
AF483549-1|AAL86908.1|  102|Homo sapiens fat cell-specific low m...    31   3.4  

>BC021136-1|AAH21136.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 36/111 (32%), Positives = 61/111 (54%)
 Frame = +3

Query: 144 KKTDDQKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKLVPYGKSTHDKVNEKWT 323
           KK++   V + +YYE+LC   + F+  +L P W     ++ V LVPYG +    V+ +W 
Sbjct: 55  KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 114

Query: 324 FTCHHGPDECYGNKMQACILKDRSLQDTEKMELVICLMSQASPDKSLDTCL 476
           F C HG +EC  NK++AC+L +  ++       ++C+      ++SL  CL
Sbjct: 115 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCL 163


>AF097362-1|AAF04618.1|  261|Homo sapiens gamma-interferon inducible
           lysosomal thiol reductase protein.
          Length = 261

 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 36/111 (32%), Positives = 61/111 (54%)
 Frame = +3

Query: 144 KKTDDQKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKLVPYGKSTHDKVNEKWT 323
           KK++   V + +YYE+LC   + F+  +L P W     ++ V LVPYG +    V+ +W 
Sbjct: 66  KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 125

Query: 324 FTCHHGPDECYGNKMQACILKDRSLQDTEKMELVICLMSQASPDKSLDTCL 476
           F C HG +EC  NK++AC+L +  ++       ++C+      ++SL  CL
Sbjct: 126 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCL 174


>AB049659-1|BAC98466.1|  250|Homo sapiens legumaturain protein.
          Length = 250

 Score = 83.8 bits (198), Expect = 3e-16
 Identities = 36/111 (32%), Positives = 61/111 (54%)
 Frame = +3

Query: 144 KKTDDQKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKLVPYGKSTHDKVNEKWT 323
           KK++   V + +YYE+LC   + F+  +L P W     ++ V LVPYG +    V+ +W 
Sbjct: 55  KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 114

Query: 324 FTCHHGPDECYGNKMQACILKDRSLQDTEKMELVICLMSQASPDKSLDTCL 476
           F C HG +EC  NK++AC+L +  ++       ++C+      ++SL  CL
Sbjct: 115 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCL 163


>BC031020-1|AAH31020.1|  250|Homo sapiens interferon,
           gamma-inducible protein 30 protein.
          Length = 250

 Score = 83.4 bits (197), Expect = 5e-16
 Identities = 36/111 (32%), Positives = 61/111 (54%)
 Frame = +3

Query: 144 KKTDDQKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKLVPYGKSTHDKVNEKWT 323
           KK++   V + +YYE+LC   + F+  +L P W     ++ V LVPYG +    V+ +W 
Sbjct: 55  KKSNAPLVNVTLYYEALCGGCQAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 114

Query: 324 FTCHHGPDECYGNKMQACILKDRSLQDTEKMELVICLMSQASPDKSLDTCL 476
           F C HG +EC  NK++AC+L +  ++       ++C+      ++SL  CL
Sbjct: 115 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCL 163


>J03909-1|AAA36105.1|  303|Homo sapiens gamma-interferon-inducible
           protein precursor protein.
          Length = 303

 Score = 72.5 bits (170), Expect = 9e-13
 Identities = 29/86 (33%), Positives = 49/86 (56%)
 Frame = +3

Query: 144 KKTDDQKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKLVPYGKSTHDKVNEKWT 323
           KK++   V + +YYE+LC   + F+  +L P W     ++ V  VPYG +    V+ +W 
Sbjct: 66  KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTSVPYGNAQEQNVSGRWE 125

Query: 324 FTCHHGPDECYGNKMQACILKDRSLQ 401
           F C  G +EC  NK++AC+L +  ++
Sbjct: 126 FKCQLGEEECKFNKVEACVLDELDME 151


>AK123477-1|BAC85622.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41483 fis, clone BRTHA2002808, highly  similar
           to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
           ).
          Length = 148

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/73 (32%), Positives = 41/73 (56%)
 Frame = +3

Query: 258 LVKVKLVPYGKSTHDKVNEKWTFTCHHGPDECYGNKMQACILKDRSLQDTEKMELVICLM 437
           ++ V LVPYG +    V+ +W F C HG +EC  NK++AC+L +  ++       ++C+ 
Sbjct: 3   ILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCME 60

Query: 438 SQASPDKSLDTCL 476
                ++SL  CL
Sbjct: 61  EFEDMERSLPLCL 73


>EF471359-1|ABO86192.1|  270|Homo sapiens MHC class I antigen
           protein.
          Length = 270

 Score = 33.5 bits (73), Expect = 0.49
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = +1

Query: 208 RSSSRHSWRPS--GGTSEDSSRLSWCLMERARMT 303
           ++ +R SWRP   G     S RL WCL+ER+R T
Sbjct: 223 QTHTRSSWRPGLQGMEPSRSGRLWWCLLERSRDT 256


>AC007192-3|AAD22672.1|  101|Homo sapiens INIP_HUMAN [AA 4- 104]
           protein.
          Length = 101

 Score = 33.5 bits (73), Expect = 0.49
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 144 KKTDDQKVKIAVYYESLCPDSKKFITTQLAPVW 242
           KK++   V + +YYE+LC   + F+  +L P W
Sbjct: 63  KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 95


>AF483549-1|AAL86908.1|  102|Homo sapiens fat cell-specific low
           molecular weight protein beta protein.
          Length = 102

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = -1

Query: 368 HLISVAFVRSVMARESPLFIHLVMRALSIRHQL--NLDES---SEVPPDGRQLCRDELLT 204
           H I +AF  S+ A    LF+ L+  + S   Q+  N DES   SEV P  R +  DEL  
Sbjct: 36  HSIVIAFWVSLAAFVVLLFLILLYMSWSASPQMSFNTDESLLHSEVLPQTRAISCDELQA 95

Query: 203 VRAEG 189
            R EG
Sbjct: 96  PREEG 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,374,876
Number of Sequences: 237096
Number of extensions: 1509380
Number of successful extensions: 3604
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3604
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)