Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_C11
         (536 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   1.1  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   6.0  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   8.0  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   8.0  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 228 LAPVWRDFRGLVKVKLVPYGKSTHDKV 308
           L  VW D++G+V  +L+P  ++ +  V
Sbjct: 189 LLSVWWDYKGIVYFELLPPNRTINSVV 215


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 237 VWRDFRGLVKVKLVPYGKSTHDKV 308
           VW D +G+V  +L+P  ++ +  V
Sbjct: 71  VWWDHKGIVYFELLPPNRTINSVV 94


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 252 RGLVKVKLVPYGKSTHDKVNEKWTFTCHHGPDECY 356
           + LV   L P       K  ++WTFT   G D  Y
Sbjct: 24  QNLVNTVLQPRPSFELSKNGDEWTFTSSSG-DNTY 57


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 252 RGLVKVKLVPYGKSTHDKVNEKWTFTCHHGPDECY 356
           + LV   L P       K  ++WTFT   G D  Y
Sbjct: 26  QNLVNTVLQPRPSFELSKNGDEWTFTSSSG-DNTY 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,967
Number of Sequences: 438
Number of extensions: 3017
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)