Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C08
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 59 2e-09
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 56 1e-08
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 52 2e-07
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 52 3e-07
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 39 0.002
08_02_1590 + 28074137-28074247,28074791-28074886,28074976-280750... 36 0.022
08_02_0091 + 12258666-12258974,12259195-12259637,12259732-122598... 32 0.28
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 27 5.9
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 27 7.8
04_04_1603 - 34716753-34717097,34717512-34717659,34717747-347179... 27 7.8
02_05_0602 + 30283893-30284170,30286259-30286305,30286534-302875... 27 7.8
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/63 (44%), Positives = 38/63 (60%)
Frame = +1
Query: 52 PCIQGTMDPPWRLTTREYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAKE 231
P QG P + ++ D +Y D + +G++LWQVKSGT+F+NFL TDDP LAK
Sbjct: 294 PNYQGKWKAPM-IDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNFLITDDPELAKT 352
Query: 232 KGE 240
E
Sbjct: 353 FAE 355
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPWIHP 82
I NP+YKG W K+I NP Y+G W P
Sbjct: 277 IPNPEYKGPWKQKKIKNPNYQGKWKAP 303
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYK-GPWIHPGD 88
I NP+Y+G W IDNP +K P+I+ D
Sbjct: 291 IKNPNYQGKWKAPMIDNPDFKDDPYIYAFD 320
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 23 GVWAPKQIDNPAYKGPW 73
G W I NP YKGPW
Sbjct: 270 GEWTAPTIPNPEYKGPW 286
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1
Query: 100 EYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAKEKGE 240
+Y D +Y D + +G++LWQVKSGT+F+N L TDDP AK+ E
Sbjct: 316 DYKDDPYIYAFDSLNHIGIELWQVKSGTLFDNILITDDPEYAKKFAE 362
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPWIHP 82
I NP+YKG W K++ NP YKG W P
Sbjct: 284 IPNPEYKGPWNQKKLKNPNYKGKWKAP 310
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYK-GPWIHPGD 88
+ NP+YKG W I NP YK P+I+ D
Sbjct: 298 LKNPNYKGKWKAPLIPNPDYKDDPYIYAFD 327
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 23 GVWAPKQIDNPAYKGPW 73
G W I NP YKGPW
Sbjct: 277 GEWTAPTIPNPEYKGPW 293
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 10 PRLQGRLGT*TD*QPCIQGTMDPPWRLTTREYTPDSNLYKRDEICSVGLDLWQVKSGTIF 189
P +GR P +G PW + E+ D +LY + VG+++WQVK+G++F
Sbjct: 278 PEYKGRWKRKKIKNPNYKGKWKIPW-IDNPEFEDDPDLYVLKPLQYVGIEVWQVKAGSVF 336
Query: 190 NNFLFTDDPALAKE-KGEIIKKMQEGEKK 273
+N L DDP A+ E+ +E EK+
Sbjct: 337 DNILICDDPEYARSVVDEVRAANKEAEKE 365
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPWIHP 82
I NP+YKG W K+I NP YKG W P
Sbjct: 275 IPNPEYKGRWKRKKIKNPNYKGKWKIP 301
Score = 33.5 bits (73), Expect = 0.090
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 14 DYKGVWAPKQIDNPAYKGPW 73
D GVW P+ I NP YKG W
Sbjct: 265 DDDGVWKPRMIPNPEYKGRW 284
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYK 64
I NP+YKG W IDNP ++
Sbjct: 289 IKNPNYKGKWKIPWIDNPEFE 309
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 51.6 bits (118), Expect = 3e-07
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +1
Query: 52 PCIQGTMDPPWRLTTREYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAKE 231
P +G PW + E+ D +LY + +G+++WQVK+G++F+N L DDP A++
Sbjct: 292 PNYKGKWKIPW-IDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPEYARK 350
Query: 232 KGE 240
E
Sbjct: 351 AAE 353
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPWIHP 82
I NP YKG W K+I NP YKG W P
Sbjct: 275 IPNPAYKGPWKRKKIKNPNYKGKWKIP 301
Score = 38.7 bits (86), Expect = 0.002
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 14 DYKGVWAPKQIDNPAYKGPW 73
D G+W P+ I NPAYKGPW
Sbjct: 265 DDDGIWKPRMIPNPAYKGPW 284
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYK 64
I NP+YKG W IDNP ++
Sbjct: 289 IKNPNYKGKWKIPWIDNPEFE 309
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAY 61
IDNP+YKG+W P++I NP Y
Sbjct: 331 IDNPNYKGIWKPQEIPNPEY 350
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +2
Query: 8 NPDYKGVWAPKQIDNPAYKGPW 73
NP YKG W IDNP YKG W
Sbjct: 319 NPAYKGKWHAPLIDNPNYKGIW 340
Score = 34.7 bits (76), Expect = 0.039
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 133 DEICSVGLDLWQVKSGTIFNNFLFTDDPALA 225
D I ++G+++W ++ G +F+N L DD +A
Sbjct: 359 DPIAAIGIEIWTMQDGILFDNILIADDEKVA 389
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Frame = +2
Query: 2 IDNPDYK-----GVWAPKQIDNPAYKGPWIHP 82
IDNP + G W NPAYKG W P
Sbjct: 298 IDNPKCEEAPGCGEWKRPMKQNPAYKGKWHAP 329
>08_02_1590 +
28074137-28074247,28074791-28074886,28074976-28075023,
28075278-28075430
Length = 135
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 166 QVKSGTIFNNFLFTDDPALAKEKGE 240
+VKSGT+F+N L TDDP AK+ E
Sbjct: 37 RVKSGTLFDNILITDDPEYAKKFAE 61
>08_02_0091 +
12258666-12258974,12259195-12259637,12259732-12259873,
12259985-12260209,12260340-12260402,12260486-12260560,
12261900-12262160
Length = 505
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 156 ETDRAYLITLVQVRVWSVFTGCQSPGWIHGPLYAGLS 46
+ +R+Y + VR+W V SP W+HG A L+
Sbjct: 120 DMERSYKFMIRHVRLWKVAFHGTSPRWVHGMYLAALA 156
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +1
Query: 415 ACVCQDNTCTDGYY---LAYVCVC 477
AC+ + + C DGY+ L Y C+C
Sbjct: 247 ACISEHSKCMDGYFAPILGYNCLC 270
>06_03_0092 +
16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 97 REYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAKEKGEIIK-KMQEGE 267
RE DS +RD + L K I + ++ +DP +A GE++K K +E E
Sbjct: 520 RETGADSMAPRRDRREGLPWPLHGTKVNIIVGSHVWAEDPEIAWVDGEVVKIKGEEAE 577
>04_04_1603 -
34716753-34717097,34717512-34717659,34717747-34717984,
34718075-34718285,34718398-34718513,34718698-34718793,
34719279-34719306
Length = 393
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 EYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAKEKGEI--IKKMQE 261
EY L KR +I S G+ + ++ SG + L DD L ++ E+ + K++E
Sbjct: 236 EYAWHGQLTKRADIYSFGVLVLEIVSGKSSSRSLLADDKILLEKAWELHEVGKLKE 291
>02_05_0602 +
30283893-30284170,30286259-30286305,30286534-30287510,
30287611-30287920,30288561-30290197
Length = 1082
Score = 27.1 bits (57), Expect = 7.8
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 205 TDDPALAKEKGEIIKKMQEGEKKMK 279
+DDP A++ GE++K +++ K +K
Sbjct: 496 SDDPIAAQKAGEVLKNLEKCSKNIK 520
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,583,367
Number of Sequences: 37544
Number of extensions: 180053
Number of successful extensions: 557
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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