Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C08
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 58 2e-09
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 58 2e-09
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 38 0.004
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 28 3.0
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 27 9.2
U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associa... 27 9.2
AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein. 27 9.2
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 27 9.2
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 58.4 bits (135), Expect = 2e-09
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPWIHP 82
IDNP+YKG W PKQI NPAYKG WIHP
Sbjct: 261 IDNPEYKGEWKPKQIKNPAYKGKWIHP 287
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 52 PCIQGTMDPPWRLTTREYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAK- 228
P +G P + EYTPD LY + ++G DLWQVKSGTIF+N + TD A+
Sbjct: 278 PAYKGKWIHP-EIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIITDSVEEAEA 336
Query: 229 EKGEIIKKMQEGEKKMK 279
E K++ EK+ K
Sbjct: 337 HAAETFDKLKTVEKEKK 353
Score = 32.3 bits (70), Expect = 0.19
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 23 GVWAPKQIDNPAYKGPW 73
G W P IDNP YKG W
Sbjct: 254 GEWEPPMIDNPEYKGEW 270
Score = 29.9 bits (64), Expect = 0.99
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAY 61
I NP YKG W +I+NP Y
Sbjct: 275 IKNPAYKGKWIHPEIENPEY 294
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 58.4 bits (135), Expect = 2e-09
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPWIHP 82
IDNP+YKG W PKQI NPAYKG WIHP
Sbjct: 261 IDNPEYKGEWKPKQIKNPAYKGKWIHP 287
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 52 PCIQGTMDPPWRLTTREYTPDSNLYKRDEICSVGLDLWQVKSGTIFNNFLFTDDPALAK- 228
P +G P + EYTPD LY + ++G DLWQVKSGTIF+N + TD A+
Sbjct: 278 PAYKGKWIHP-EIENPEYTPDDELYSYESWGAIGFDLWQVKSGTIFDNIIITDSVEEAEA 336
Query: 229 EKGEIIKKMQEGEKKMK 279
E K++ EK+ K
Sbjct: 337 HAAETFDKLKTVEKEKK 353
Score = 32.3 bits (70), Expect = 0.19
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 23 GVWAPKQIDNPAYKGPW 73
G W P IDNP YKG W
Sbjct: 254 GEWEPPMIDNPEYKGEW 270
Score = 29.9 bits (64), Expect = 0.99
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAY 61
I NP YKG W +I+NP Y
Sbjct: 275 IKNPAYKGKWIHPEIENPEY 294
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGPW 73
I NP YKG W +I NPA+KG W
Sbjct: 366 IKNPKYKGKWIRPKISNPAFKGKW 389
Score = 33.5 bits (73), Expect = 0.080
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 5/32 (15%)
Frame = +2
Query: 2 IDNPDYKGV-----WAPKQIDNPAYKGPWIHP 82
IDNP KG+ W I NP YKG WI P
Sbjct: 347 IDNPACKGLSGCGTWKAPTIKNPKYKGKWIRP 378
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 2 IDNPDYKGVWAPKQIDNPAYKGP 70
I NP +KG W + IDNP Y P
Sbjct: 380 ISNPAFKGKWTARLIDNPNYFEP 402
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 176 DLTCHKSRPTEHISSRLYRFESGVYS 99
D+ C++SR EHI++ + F++ +YS
Sbjct: 385 DVPCYRSRSKEHITNGMADFKNDMYS 410
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = -1
Query: 187 RWFQT*PAISRDRQSISHHACTGSSLECIHGLSISRVDPWSLVCRVVNL 41
+W +T I+++ + + + + LEC+ ++ +V PW+ + + NL
Sbjct: 447 KWIETLIGIAKNEGADNSESKSSFGLECMGTVAELKVAPWAKIIQSENL 495
>U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform a protein.
Length = 696
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = -1
Query: 187 RWFQT*PAISRDRQSISHHACTGSSLECIHGLSISRVDPWSLVCRVVNL 41
+W +T I+++ + + + + LEC+ ++ +V PW+ + + NL
Sbjct: 464 KWIETLIGIAKNEGADNSESKSSFGLECMGTVAELKVAPWAKIIQSENL 512
>AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein.
Length = 696
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = -1
Query: 187 RWFQT*PAISRDRQSISHHACTGSSLECIHGLSISRVDPWSLVCRVVNL 41
+W +T I+++ + + + + LEC+ ++ +V PW+ + + NL
Sbjct: 464 KWIETLIGIAKNEGADNSESKSSFGLECMGTVAELKVAPWAKIIQSENL 512
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = -1
Query: 187 RWFQT*PAISRDRQSISHHACTGSSLECIHGLSISRVDPWSLVCRVVNL 41
+W +T I+++ + + + + LEC+ ++ +V PW+ + + NL
Sbjct: 447 KWIETLIGIAKNEGADNSESKSSFGLECMGTVAELKVAPWAKIIQSENL 495
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,829,273
Number of Sequences: 27780
Number of extensions: 154272
Number of successful extensions: 461
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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