Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C04
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17A3.09c |||lipoate-protein ligase A |Schizosaccharomyces po... 43 3e-05
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 28 0.81
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 28 1.1
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.4
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 2.5
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 26 3.3
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 26 3.3
SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase Gsk3|Schi... 26 3.3
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 4.3
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 25 7.5
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 7.5
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 25 7.5
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 10.0
SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 10.0
>SPBC17A3.09c |||lipoate-protein ligase A |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 8 IIVRDKYKVSGTAAKLGHLTGYHHCTLLVNANKADLSKALAKREHGIQTHATASTRSEVA 187
++ + + K+SG+A K+ YHH T+L+N++ + + L GI + +STRS V+
Sbjct: 145 VLAQSQRKISGSAYKISRNRCYHHGTMLLNSDLEGVREYLRSPSTGILSKGVSSTRSPVS 204
Query: 188 N 190
N
Sbjct: 205 N 205
Score = 35.1 bits (77), Expect = 0.007
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 351 PGLADLKNELQSWDWCYGKTPIF 419
P + NELQSW+W +G+TP F
Sbjct: 264 PSILKAVNELQSWEWTFGQTPSF 286
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 28.3 bits (60), Expect = 0.81
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 44 AAKLGHLTGYHHCTLLVNANKADLSK---ALAKREHGIQTHATASTRSEVANLTDLDNRV 214
A L H G +L +K D +K LA +E + +S +S + D
Sbjct: 506 AKHLSHNYGSRAPLILELYSKTDFNKLPVTLADKEVFAPSSDASSDKS--VSYASFDEPF 563
Query: 215 TVESLQTALGYEYLRTP 265
TV L+ ++ YEY RTP
Sbjct: 564 TVAELKYSIKYEYTRTP 580
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.9 bits (59), Expect = 1.1
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -2
Query: 328 NELESTLF*DQVLSSVI*MECRSAEVLVA*RSL*AFHSHSIIQVGQIRHLGPRRCRRVSL 149
N + TL DQV +I EC S EV + +L SH + +V ++ C +VSL
Sbjct: 382 NSFDFTLENDQVPPRLIASECTSLEVFIQHITLSRILSHFVRKVYPVKSPSDSHC-KVSL 440
Query: 148 YAM 140
A+
Sbjct: 441 PAV 443
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.4
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +2
Query: 92 VNANKADLSKALAKREHGIQTHATASTRSEVANLTDLDNRVTVESLQTALG--YEYLRTP 265
+N K +L ++ EH +T + E A T+ + + SLQT E L
Sbjct: 534 LNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNELSESKNSLQTLCNAFQEKLAKS 593
Query: 266 ALHLDDGGQNLISKQRGFQFVN 331
+ L + QN S F+ +N
Sbjct: 594 VMQLKENEQNFSSLDTSFKKLN 615
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 354 GLADLKNELQSWDWCYGKTPIFTVS 428
G L NEL +W YG TP F++S
Sbjct: 94 GSKTLTNELSTWS--YGLTPFFSIS 116
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1220
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 420 TVSRTFPV--PAEILAPSKVYSATQELVITMTVEKGLIN 530
TVS T V PA S VYS TQE T+ G ++
Sbjct: 673 TVSGTVEVIEPAAGTVTSTVYSGTQEYTTTLATASGTVS 711
Score = 25.0 bits (52), Expect = 7.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 420 TVSRTFPV--PAEILAPSKVYSATQELVITMTVEKGLIN 530
TVS T V PA + VYS TQE T+ G ++
Sbjct: 637 TVSGTVEVIEPAAGTVTTTVYSGTQEYTTTLATASGTVS 675
Score = 25.0 bits (52), Expect = 7.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 420 TVSRTFPV--PAEILAPSKVYSATQELVITMTVEKGLIN 530
TVS T V PA + VYS TQE T+ G ++
Sbjct: 709 TVSGTVEVIEPAAGTVTTTVYSGTQEYTTTLATASGTVS 747
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = -1
Query: 554 GGMLRVTSVNETLFHGHSNNQFL------SGRVDF*WCKYLGRNR 438
GG R+T +NE HS Q L S V + CKY +NR
Sbjct: 145 GGNWRITKINENYSECHSYPQALAVPASISDSVIYYGCKYRSKNR 189
>SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase
Gsk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.2 bits (55), Expect = 3.3
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = -3
Query: 354 LGTKSSVGLTNWNPRCFEIRFCPPSSRWSAGVRRYS*PSAVCRLSTVTRLSKSVRFATSD 175
LGT S + NP E RF P R R +S L + LSK +++ +D
Sbjct: 249 LGTPSREQIKTMNPNYMEHRF--PQIRPQPLSRVFS---RSVPLDALDLLSKMLQYTPTD 303
Query: 174 RVDAVA*VCMP 142
R+ A +C P
Sbjct: 304 RLTAAEAMCHP 314
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 214 HSIIQVGQIRHLGPRRCRRVSLYAML 137
HS +++GQI HL + R++ L +L
Sbjct: 84 HSFLEIGQIPHLKLSKTRKIVLEVVL 109
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 25.0 bits (52), Expect = 7.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 107 ADLSKALAKREHGIQTHATASTRSEVA-NLTDLDNRVTVESLQTALGYEYLRTPAL-HLD 280
A+L+K + ++ A A+ + V + TDL N V E L+ G E++ + H+D
Sbjct: 189 AELAKTPSAPAAALKKAAEAAEPATVTEDATDLQNEVDQELLKDMYGKEHVNIVFIGHVD 248
Query: 281 DGGQNL 298
G L
Sbjct: 249 AGKSTL 254
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 444 PAEILAPSKVYSATQELVITMT 509
P +I AP+ Y+ATQE ++ T
Sbjct: 395 PQKITAPTSPYAATQEELLAFT 416
>SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1466
Score = 25.0 bits (52), Expect = 7.5
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 68 GYHHCTLLVNANKADLSKALAKREHGIQTHATASTRSEVANLTDLDNR--VTVESLQTAL 241
G + T L N N+ + +R GIQ A A+ S LTD + T+ + L
Sbjct: 987 GTYFMTSLANVNRDSVGYVDFERLEGIQGIALANIVSNTKELTDGGTKKLQTLITFNDGL 1046
Query: 242 GYEYL 256
+ YL
Sbjct: 1047 DWSYL 1051
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 24.6 bits (51), Expect = 10.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 158 ATASTRSEVANLTDLDNRVTVESLQTALGYEYLRTPAL 271
A +T ++ ANL + +T E+ T+ G E +P+L
Sbjct: 67 AAPNTHAQQANLQSGNTSITHETQSTSRGQEATTSPSL 104
>SPBC29A3.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 24.6 bits (51), Expect = 10.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 355 PGNQVIGRVNELESTL 308
PGN+ + ++NELES L
Sbjct: 14 PGNKCLAKLNELESIL 29
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,261,972
Number of Sequences: 5004
Number of extensions: 44272
Number of successful extensions: 135
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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