Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C04
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 33 0.11
U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z73972-8|CAI46601.1| 320|Caenorhabditis elegans Hypothetical pr... 28 5.2
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 5.2
U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 27 9.1
D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein. 27 9.1
D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein. 27 9.1
D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein. 27 9.1
AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa (tetradec... 27 9.1
AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa (tetradec... 27 9.1
>Z92780-3|CAB07178.2| 289|Caenorhabditis elegans Hypothetical
protein C45G3.3 protein.
Length = 289
Score = 43.2 bits (97), Expect = 1e-04
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 KVSGTAAKLGHLTGYHHCTLLVNANKADLSKAL-AKREHGIQTHATASTRS-EVANLTDL 202
K SGTAA++ YHH TLLV A+ LSK+L + I+++AT S R+ V L
Sbjct: 141 KCSGTAARIARGQAYHHLTLLVGADLQVLSKSLKSPWRDKIESNATRSVRAPAVGFLKQD 200
Query: 203 DNRVTVESLQTALGYEY 253
D VE + A+ Y
Sbjct: 201 DANANVEQSKLAIVEAY 217
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 357 LADLKNELQSWDWCYGKTPIFTVSR 431
++ + +EL++W W YGK+P F SR
Sbjct: 241 ISKIFDELKAWKWIYGKSPKFQYSR 265
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 200 LDNRVTVESLQTALGYEYLRTPALHLDDGGQNLISKQRGFQFVNPTDDLV 349
L +R E A G+ + A H D +NL+ +Q FQF+NP D++
Sbjct: 197 LHSREFYEQCFKAAGFSQIEWIAPHFTDHAKNLLGEQFCFQFLNPPCDIM 246
>U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical
protein B0554.7 protein.
Length = 491
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 191 LTDLDNRVTVES---LQTALGYEYLRTPALHLDDGGQNLISKQRGFQFVNPTDDLVPRS 358
LT R ++ES LQ A+G L A+ L GG IS+ RGF+ + + D+V S
Sbjct: 129 LTSHSTRRSIESNVSLQWAIGCGSLILGAMIL--GGMTWISEDRGFENLKNSTDIVEHS 185
>Z73972-8|CAI46601.1| 320|Caenorhabditis elegans Hypothetical
protein F15H10.9 protein.
Length = 320
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 397 HQSQLCNSFFKSARPGNQVIGRVNELEST 311
+Q L FF+ NQ+I R+N+LES+
Sbjct: 250 YQILLNECFFEVREHANQIIARINDLESS 278
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical
protein F48E3.3 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 71 YHHCTLLVNANKADLSKALAKREHGIQTHATASTRSEVANLTD---LDNRVTVESLQTAL 241
Y +VNA AD L + THA A ++ V++L L NR +E +
Sbjct: 290 YQAAQKIVNAGPADAIGTLEEYSQNFPTHARALAKTSVSDLLRKEVLQNRKMLEKASIEV 349
Query: 242 GYEYLRTPALHLD 280
G L ++ D
Sbjct: 350 GETSLYINGINQD 362
>U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical
protein ZK418.10 protein.
Length = 293
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 415 IGVFP*HQSQLCNSFFKSARPGNQVIGRVNELEST 311
+ +FP H SQL N F + + +Q+IG++ EL+ T
Sbjct: 165 VDIFPEHSSQLFNPHFLN-KIRSQLIGKLIELDIT 198
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 402 GKTPIFTVSRTFPVPAEILAPSKVY-SATQELVITMTVEKGLINRRDP 542
G +P T PVP+ I +PSKV + Q+ +IT TV +I +P
Sbjct: 335 GVSPSPVPVSTPPVPSTIPSPSKVVPNPPQKSLITPTVPPSMIQTVNP 382
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 173 RSEVANLTDLDNRVTVESLQTALGYEYL----RTPALHLDDGGQNLISKQRGFQFVNPTD 340
R+ +++ D D V + + YEY RT + ++ ++ KQRG+QFV D
Sbjct: 88 RAAISSTMDSDI-VIISDCRRRTDYEYFSANYRTVTIRIETSEED--RKQRGYQFVEGVD 144
Query: 341 D 343
D
Sbjct: 145 D 145
>D49525-2|BAA08471.1| 567|Caenorhabditis elegans TPA-1B protein.
Length = 567
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 38 GTAAKLGHLTGYHHCTLLVNANKADLSKALAKREHGIQ--THATASTRSEVANL 193
G ++ ++ +H C L++ K L++ H I+ THATAS +ANL
Sbjct: 128 GLRCEVCNVACHHKCERLMSNLCGVNQKQLSEMYHEIKRGTHATASCPPNIANL 181
>D49525-1|BAA08470.1| 704|Caenorhabditis elegans TPA-1A protein.
Length = 704
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 38 GTAAKLGHLTGYHHCTLLVNANKADLSKALAKREHGIQ--THATASTRSEVANL 193
G ++ ++ +H C L++ K L++ H I+ THATAS +ANL
Sbjct: 265 GLRCEVCNVACHHKCERLMSNLCGVNQKQLSEMYHEIKRGTHATASCPPNIANL 318
>D14815-1|BAA03556.1| 557|Caenorhabditis elegans TPA-1 protein.
Length = 557
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 38 GTAAKLGHLTGYHHCTLLVNANKADLSKALAKREHGIQ--THATASTRSEVANL 193
G ++ ++ +H C L++ K L++ H I+ THATAS +ANL
Sbjct: 118 GLRCEVCNVACHHKCERLMSNLCGVNQKQLSEMYHEIKRGTHATASCPPNIANL 171
>AF078781-3|AAC26917.1| 567|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform b protein.
Length = 567
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 38 GTAAKLGHLTGYHHCTLLVNANKADLSKALAKREHGIQ--THATASTRSEVANL 193
G ++ ++ +H C L++ K L++ H I+ THATAS +ANL
Sbjct: 128 GLRCEVCNVACHHKCERLMSNLCGVNQKQLSEMYHEIKRGTHATASCPPNIANL 181
>AF078781-2|AAC26916.1| 704|Caenorhabditis elegans Tpa
(tetradecanoyl phorbol acetate)resistant protein 1,
isoform a protein.
Length = 704
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 38 GTAAKLGHLTGYHHCTLLVNANKADLSKALAKREHGIQ--THATASTRSEVANL 193
G ++ ++ +H C L++ K L++ H I+ THATAS +ANL
Sbjct: 265 GLRCEVCNVACHHKCERLMSNLCGVNQKQLSEMYHEIKRGTHATASCPPNIANL 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,694,874
Number of Sequences: 27780
Number of extensions: 264181
Number of successful extensions: 789
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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