Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C03
(517 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 188 4e-48
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 188 4e-48
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 188 4e-48
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 168 4e-42
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 166 2e-41
AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p pro... 32 0.53
AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA... 32 0.53
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 29 4.9
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 29 4.9
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 29 4.9
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 188 bits (458), Expect = 4e-48
Identities = 88/113 (77%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
Frame = +2
Query: 173 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 352
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 353 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP 508
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGP 113
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 188 bits (458), Expect = 4e-48
Identities = 88/113 (77%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
Frame = +2
Query: 173 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 352
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 353 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP 508
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGP 113
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 188 bits (458), Expect = 4e-48
Identities = 88/113 (77%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
Frame = +2
Query: 173 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 352
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 353 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP 508
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGP 113
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 168 bits (408), Expect = 4e-42
Identities = 79/110 (71%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +2
Query: 173 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 352
M +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 353 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP 499
AWRHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P
Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGP 110
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 166 bits (403), Expect = 2e-41
Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
Frame = +2
Query: 179 MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 358
+PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2 IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61
Query: 359 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP 499
RHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P
Sbjct: 62 RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGP 109
>AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p
protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.53
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 420 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 331
KCR +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA
protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.53
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 420 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 331
KCR +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
protein.
Length = 1640
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 758 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 793
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 376 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 269
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,208,576
Number of Sequences: 53049
Number of extensions: 439584
Number of successful extensions: 832
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -