Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C01
(437 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0021 - 214401-214613,214707-214790,214887-215041,215165-21... 65 3e-11
03_01_0415 + 3191392-3191952 34 0.057
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 31 0.53
03_02_0090 - 5564326-5567280 30 0.71
02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-51... 29 1.6
02_01_0545 + 3996568-3996645,3998061-3998168,3998409-3998493,399... 29 2.2
01_06_0937 + 33175966-33178020 29 2.2
05_01_0125 - 853691-853984,854027-854659 28 3.8
08_02_0242 - 14701116-14702666 27 5.0
07_03_0439 + 18212584-18213065,18214164-18215010 27 5.0
02_04_0104 + 19769744-19769893,19770014-19770252,19771000-197710... 27 5.0
09_06_0136 - 21074420-21074746,21075905-21077026 27 6.6
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 27 6.6
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 27 6.6
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 27 6.6
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 27 6.6
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 27 6.6
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 27 6.6
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 27 6.6
01_06_0414 + 29182350-29183812,29184211-29184346 27 6.6
11_03_0182 + 11307275-11307368,11307485-11307594,11307654-113078... 27 8.7
>06_01_0021 -
214401-214613,214707-214790,214887-215041,215165-215234,
215334-215509,215631-215803,216715-216938
Length = 364
Score = 64.9 bits (151), Expect = 3e-11
Identities = 34/57 (59%), Positives = 37/57 (64%)
Frame = +1
Query: 31 ELKYLSGFGSEFSSEDPRKPNALPVGQNNPQRCPYGLYAEQLSGTAFTAPRHDNKRS 201
E YLSG G+ SSE LP GQN+P CP GLYAEQLSGT FTAPR N R+
Sbjct: 21 EYVYLSGLGNSLSSE--AVAGTLPRGQNSPLVCPLGLYAEQLSGTPFTAPRARNLRT 75
>03_01_0415 + 3191392-3191952
Length = 186
Score = 33.9 bits (74), Expect = 0.057
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Frame = +1
Query: 115 NPQRCPYGLYAEQLSGTAFTAPRHDNKRSWLYRIRPSVVHKPFKKLNIAKHFTHNWDGQE 294
+P P Y+ T + P H KRS I PS +L F+++
Sbjct: 55 SPPPPPARTYSSPEPKTPKSQPHHGKKRSRAISISPSTSPPSRPELWAGPAFSNSPPPSS 114
Query: 295 -PDP----NQSRWLPFDLPPTGTTVDFVAGLHTVCGAGDPRSRHGIA 420
P P +Q R + +LPP G + D V LH P + G++
Sbjct: 115 LPIPKFSLHQKRSVSLELPPAGRSDDVVVPLHAKSAPSSPTAGSGVS 161
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 30.7 bits (66), Expect = 0.53
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Frame = +1
Query: 73 EDPRKPNALPVGQNNPQR--------CPYGLYAEQLSGTAFTAPRHDNKRSWLYRIRPSV 228
E P P A+PV ++P P + +Q G P R L+ RP V
Sbjct: 169 EYPYPPFAVPVPSHDPHAGKSGYENSMPAYVPVDQAGGNEGNRPVPPQPRGDLHAWRPPV 228
Query: 229 VHKPFKKLNIAKHFTHNWDGQE 294
+P L HF HNW +
Sbjct: 229 GARPQPGLEGRGHFNHNWQNPQ 250
>03_02_0090 - 5564326-5567280
Length = 984
Score = 30.3 bits (65), Expect = 0.71
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 101 LLDKITRNVVRMGFTRNSCRAQRSLLHGMTINARGYIGYD 220
+LD + RNV R+ T AQRS LHG ++AR +G D
Sbjct: 28 MLD-VARNVRRLEETVGQLAAQRSSLHGAIVDAR-VVGVD 65
>02_01_0073 -
509377-509425,510200-510270,510420-510539,510684-510769,
510843-510915,510996-511718,513752-514081,514124-514210,
514494-515250,515336-515399,515477-515609,515702-515801,
515952-516088,516195-516341,516428-516478,517083-517148
Length = 997
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 418 RCRDGSEDLRRHTQCVSRLRSPPWY 344
RCR+G+E RRH CV ++ WY
Sbjct: 113 RCRNGAEKNRRHRYCVKCIKR--WY 135
>02_01_0545 +
3996568-3996645,3998061-3998168,3998409-3998493,
3998789-3999024,3999250-3999423,3999510-3999557,
3999659-3999718,3999815-3999901,4000007-4000095,
4000209-4000300,4001110-4001171,4001271-4001420,
4001507-4001722
Length = 494
Score = 28.7 bits (61), Expect = 2.2
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 276 VSEMFGN---V*LFEWFVDHGRSYPI--*PRAFIVMPWSSERCARQLFR 145
V+++FG L++WF++HG Y + P+AF+V+ S AR + R
Sbjct: 8 VTDLFGRPLFFSLYDWFLEHGSVYKLAFGPKAFVVV--SDPIVARHILR 54
>01_06_0937 + 33175966-33178020
Length = 684
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 83 ESPTLYLLDKITRNVVRMGFTRNSCRAQRS 172
E+P +YL K+ RN+ R G T ++ R R+
Sbjct: 74 EAPDVYLCTKLIRNLCRRGRTSDAARVLRA 103
>05_01_0125 - 853691-853984,854027-854659
Length = 308
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 301 PNQSRWLPFDLPPTGTTVDFVAGLHTV 381
P+ S W PF+L TG D G H V
Sbjct: 185 PSMSPWDPFELSTTGLGFDAATGEHKV 211
>08_02_0242 - 14701116-14702666
Length = 516
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 151 VPRKAHTDNVAGYFV-QQVERWAFEDLQRK-IPI 56
V + H D+ A +F+ Q+VE+W + QR+ +PI
Sbjct: 474 VLEELHVDDTAQFFLDQKVEKWRADSFQRRNLPI 507
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 397 DLRRHTQCVSRLRSPPWYRSVADRMGA 317
DLRR Q +RLRSP W V R+GA
Sbjct: 180 DLRRRRQGPARLRSPRW--RVRGRVGA 204
>02_04_0104 +
19769744-19769893,19770014-19770252,19771000-19771096,
19771213-19771362,19771450-19771576,19772543-19772655,
19772736-19772799,19772898-19772991,19773083-19773191,
19773982-19774080
Length = 413
Score = 27.5 bits (58), Expect = 5.0
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 3/104 (2%)
Frame = +1
Query: 97 LPVGQNNPQR-CPYGL-YAEQLSGTAFTA-PRHDNKRSWLYRIRPSVVHKPFKKLNIAKH 267
L V P R C YG+ A QL + + + R R P V K
Sbjct: 246 LIVNIGGPTRNCKYGVDLARQLIASTYNVLDSCGSVRVSFSRRTPRKVSDIISKEFAGHP 305
Query: 268 FTHNWDGQEPDPNQSRWLPFDLPPTGTTVDFVAGLHTVCGAGDP 399
+ WDG+EP+P+ D T D ++ L C G P
Sbjct: 306 KIYIWDGEEPNPHMGHLAWAD--AFVVTADSISMLSEACSTGKP 347
>09_06_0136 - 21074420-21074746,21075905-21077026
Length = 482
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 4 ESRLFRDMAELKYLSGFGSEFSSEDPRKPNAL 99
++R R+ + +L+G + F+SEDPR+ + L
Sbjct: 179 DARALRNHVDRSFLAGLVTLFASEDPRERDRL 210
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = -1
Query: 374 CKPATKSTVVPVGGRSNGSHR-D*FGSGSCPS-QL*VKC--LAMFSFLNGLWTTEGRIL- 210
C P+T ST GG+ S D G G P+ +L C +A S + GL T +L
Sbjct: 275 CYPSTASTATVAGGKRKASPAGDYAGGGHTPAKRLNGSCFDVAPQSVVGGLQATPSSVLA 334
Query: 209 -YNHERL 192
NH+ L
Sbjct: 335 GLNHQML 341
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 149 NSCRAQRSLLHGMTINARGYIGYDLPW 229
++C + +L +G+T+N R G D PW
Sbjct: 757 SNCFYEGTLQNGVTVNERQTPGIDFPW 783
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 59 GLWDTAGQEDYNRLRPLSYRGA 80
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 59 GLWDTAGQEDYNRLRPLSYRGA 80
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>01_06_0414 + 29182350-29183812,29184211-29184346
Length = 532
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = -2
Query: 373 VSRLRSPPWYRSVADRMGATVTDLDPALVHPNCE*NVWQCLAF*MVC---GPR----KVV 215
VS +PP + D +G T TD+ A + + V+ LA C GPR ++
Sbjct: 53 VSTFAAPPLLPLIRDTLGLTATDIGNAGI-ASVSGAVFARLAMGTACDLVGPRLASASLI 111
Query: 214 SYITTSVYCHAVEQ 173
T +VYC ++ Q
Sbjct: 112 LLTTPAVYCSSIIQ 125
>11_03_0182 +
11307275-11307368,11307485-11307594,11307654-11307856,
11307879-11307964,11308861-11308934,11308936-11309078,
11309485-11309594,11309645-11309787
Length = 320
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ Y+ R+LS RGA
Sbjct: 26 GLWGTAGQEDYSRLRILSYRGA 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,739,765
Number of Sequences: 37544
Number of extensions: 355721
Number of successful extensions: 992
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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