Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_C01
(437 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54080.2 68418.m06733 homogentisate 1,2-dioxygenase / homogen... 152 9e-38
At5g54080.1 68418.m06732 homogentisate 1,2-dioxygenase / homogen... 152 9e-38
At4g27860.1 68417.m04000 integral membrane family protein contai... 30 0.79
At4g15110.1 68417.m02322 cytochrome P450 97B3, putative (CYP97B3... 30 0.79
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 29 1.4
At5g21080.1 68418.m02510 expressed protein predicted proteins - ... 29 1.8
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 28 3.2
At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9) id... 27 4.2
At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10) i... 27 5.5
At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2) id... 27 5.5
At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6) id... 27 5.5
At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) / ... 27 5.5
At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /... 27 5.5
At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8) id... 27 5.5
At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1) (A... 27 5.5
At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) / ... 27 5.5
At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) / ... 27 5.5
At4g23560.1 68417.m03394 glycosyl hydrolase family 9 protein sim... 27 7.3
At4g18770.1 68417.m02773 myb family transcription factor (MYB98)... 27 7.3
At4g09740.1 68417.m01599 glycosyl hydrolase family 9 protein sim... 27 7.3
At4g09700.1 68417.m01594 hypothetical protein similar to zinc fi... 27 7.3
At3g45130.1 68416.m04871 cycloartenol synthase, putative / 2,3-e... 27 7.3
At2g21720.1 68415.m02584 hypothetical protein contains Pfam prof... 27 7.3
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 27 7.3
At4g32890.1 68417.m04680 zinc finger (GATA type) family protein ... 26 9.7
At1g05920.1 68414.m00621 hypothetical protein contains Pfam prof... 26 9.7
>At5g54080.2 68418.m06733 homogentisate 1,2-dioxygenase /
homogentisicase/homogentisate oxygenase / homogentisic
acid oxidase (HGO) identical to SP|Q9ZRA2 Homogentisate
1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase)
(Homogentisate oxygenase) (Homogentisic acid oxidase)
{Arabidopsis thaliana}; contains Pfam profile PF04209:
homogentisate 1,2-dioxygenase
Length = 461
Score = 152 bits (369), Expect = 9e-38
Identities = 74/142 (52%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Frame = +1
Query: 19 RDMAELKYLSGFGSEFSSEDPRKPNALPVGQNNPQRCPYGLYAEQLSGTAFTAPRHDNKR 198
+++ ELKY SGFG+ FSSE ALP+ QN+P CPYGLYAEQ+SGT+FT+PR N+R
Sbjct: 6 KELEELKYQSGFGNHFSSE--AIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQR 63
Query: 199 SWLYRIRPSVVHKPFK-KLNIAKHFTHNWD--GQEPDPNQSRWLPFDLPPTGTTVDFVAG 369
SWLYR++PSV H+PFK ++ K +D +P Q RW P D+P + +DFV G
Sbjct: 64 SWLYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIP--DSEIDFVDG 121
Query: 370 LHTVCGAGDPRSRHGIAIHVYL 435
L T+CGAG RHG AIH+Y+
Sbjct: 122 LFTICGAGSSFLRHGFAIHMYV 143
>At5g54080.1 68418.m06732 homogentisate 1,2-dioxygenase /
homogentisicase/homogentisate oxygenase / homogentisic
acid oxidase (HGO) identical to SP|Q9ZRA2 Homogentisate
1,2-dioxygenase (EC 1.13.11.5) (Homogentisicase)
(Homogentisate oxygenase) (Homogentisic acid oxidase)
{Arabidopsis thaliana}; contains Pfam profile PF04209:
homogentisate 1,2-dioxygenase
Length = 461
Score = 152 bits (369), Expect = 9e-38
Identities = 74/142 (52%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Frame = +1
Query: 19 RDMAELKYLSGFGSEFSSEDPRKPNALPVGQNNPQRCPYGLYAEQLSGTAFTAPRHDNKR 198
+++ ELKY SGFG+ FSSE ALP+ QN+P CPYGLYAEQ+SGT+FT+PR N+R
Sbjct: 6 KELEELKYQSGFGNHFSSE--AIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQR 63
Query: 199 SWLYRIRPSVVHKPFK-KLNIAKHFTHNWD--GQEPDPNQSRWLPFDLPPTGTTVDFVAG 369
SWLYR++PSV H+PFK ++ K +D +P Q RW P D+P + +DFV G
Sbjct: 64 SWLYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIP--DSEIDFVDG 121
Query: 370 LHTVCGAGDPRSRHGIAIHVYL 435
L T+CGAG RHG AIH+Y+
Sbjct: 122 LFTICGAGSSFLRHGFAIHMYV 143
>At4g27860.1 68417.m04000 integral membrane family protein contains
Pfam PF01988: Integral membrane protein
Length = 611
Score = 29.9 bits (64), Expect = 0.79
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 187 DNKRSWLYRIRPSVVHKPFKKLNIAKHFTHNWDGQEPDPNQ 309
DNKR+ L I PS + KP K+ + K T N D + DP+Q
Sbjct: 313 DNKRNRLTPIYPSSLEKPSKQ-TVNKE-TQNHDKEAADPDQ 351
>At4g15110.1 68417.m02322 cytochrome P450 97B3, putative (CYP97B3)
identical to Cytochrome P450 97B3 (SP:O23365)
[Arabidopsis thaliana]
Length = 580
Score = 29.9 bits (64), Expect = 0.79
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = -3
Query: 276 VSEMFGN---V*LFEWFVDHGRSYPI--*PRAFIVMPWSSERCARQLFR 145
VS++FG + L++WF++HG Y + P+AF+V+ S AR + R
Sbjct: 91 VSDLFGKPLFLSLYDWFLEHGGIYKLAFGPKAFVVI--SDPIIARHVLR 137
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 412 RDGSEDLRRHTQCVSRLRSPPWYRSVADRM 323
+D +D++RH C+ L+ PW++++ DR+
Sbjct: 457 KDLRKDIKRHL-CLKLLKKVPWFQAMDDRL 485
>At5g21080.1 68418.m02510 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 980
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 1 CESRLFRDMAELKYLSGFGSEFSSEDPRKPNALPVGQNNP 120
CE+ L ++ ++S ++FSS ++ ALP NP
Sbjct: 887 CEALLMGKQEKMSFMSAKSNKFSSSQTKEAVALPCSGGNP 926
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -2
Query: 430 KHEWRCRDGSEDLRRHTQCVSRLRSPPWYRSVADRMGATVTD 305
K+ +RC S + R C++ + PWY S+ + + D
Sbjct: 215 KYSFRCHPKSRNGRLDGVCINAIEFSPWYMSLIHHLMVHMID 256
>At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9)
identical to rac-like protein ARAC9 GI:5381419 from
[Arabidopsis thaliana]
Length = 209
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 69 GLWDTAGQEDYNRVRPLSYRGA 90
>At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10)
identical to rac GTP binding protein Arac10 [Arabidopsis
thaliana] GI:3702964, rac-like GTP binding protein
Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam
profile: PF00071 Ras family
Length = 215
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 59 GLWDTAGQEDYNRLRPLSYRGA 80
>At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2)
identical to RAC-like GTP binding protein ARAC2
SP:Q38903
Length = 201
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6)
identical to rac-like GTP binding protein Arac6
GI:3406757 from [Arabidopsis thaliana]
Length = 197
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) /
Rho-like GTP-binding protein (ROP6) identical to
SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
identical to cDNA Rho-like GTP binding protein (Rop6)
GI:2645642
Length = 198
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /
Rho-like GTP-binding protein (ROP1) identical to GTP
binding protein Rop1At [Arabidopsis thaliana]
GI:2558666, rac-like GTP binding protein Arac11
[Arabidopsis thaliana] GI:3603426
Length = 197
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8)
identical to rac GTP binding protein Arac8 GI:3702966
from [Arabidopsis thaliana]
Length = 208
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 59 GLWDTAGQEDYNRLRPLSYRGA 80
>At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1)
(ATGP2) identical to Rac-like GTP-binding protein
(ARAC1) SP:Q38902 from [Arabidopsis thaliana]
Length = 197
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) /
Rho-like GTP-binding protein (ROP4) identical to
RAC-like GTP-binding protein (ARAC5) SP:Q38937
[Arabidopsis thaliana], Rho-like GTP binding protein
[Arabidopsis thaliana] GI:2654009; identical to cDNA
Rho-like GTP binding protein (Rop4) GI:2654008
Length = 196
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 57 GLWDTAGQEDYNRLRPLSYRGA 78
>At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) /
Rho-like GTP-binding protein (ROP2) identical to
SP:Q38919 RAC-like GTP binding protein ARAC4 (GTP
binding protein ROP2) [Arabidopsis thaliana], Rho-like
GTP binding protein [Arabidopsis thaliana] GI:2654009
Length = 195
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 239 GLWTTEGRILYNHERLLSCRGA 174
GLW T G+ YN R LS RGA
Sbjct: 56 GLWDTAGQEDYNRLRPLSYRGA 77
>At4g23560.1 68417.m03394 glycosyl hydrolase family 9 protein
similar to cellulase GI:1039431 from [Phaseolus
vulgaris]
Length = 479
Score = 26.6 bits (56), Expect = 7.3
Identities = 8/32 (25%), Positives = 22/32 (68%)
Frame = +1
Query: 31 ELKYLSGFGSEFSSEDPRKPNALPVGQNNPQR 126
++ Y+ GFG+++ ++ + ++LP Q+ P++
Sbjct: 382 KMSYMVGFGTKYPTQPHHRGSSLPSIQSKPEK 413
>At4g18770.1 68417.m02773 myb family transcription factor (MYB98)
identical to transcription factor (MYB98) GI:15375282
from [Arabidopsis thaliana]
Length = 427
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 232 HKPFKKLNIAKHFTHNWDGQEPDPNQSRWLPFDLPPTGT--TVDFVAGLHTVCGAGD 396
H +++N+ D ++ + R +PFD PPT T ++FV C + D
Sbjct: 122 HHHHQEINLVDEHDDPMDLEQNNMMMMRMIPFDYPPTETFKPMNFVMPDEISCVSAD 178
>At4g09740.1 68417.m01599 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase; cellulase GI:1655543
from [Capsicum annuum]
Length = 478
Score = 26.6 bits (56), Expect = 7.3
Identities = 8/32 (25%), Positives = 22/32 (68%)
Frame = +1
Query: 31 ELKYLSGFGSEFSSEDPRKPNALPVGQNNPQR 126
++ Y+ GFG+++ ++ + ++LP Q+ P++
Sbjct: 382 KMSYMVGFGTKYPTQPHHRGSSLPSIQSKPEK 413
>At4g09700.1 68417.m01594 hypothetical protein similar to zinc
finger protein [Arabidopsis thaliana] GI:976277
Length = 371
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 82 EDLQRKIPIRIPISTLTPPYLE 17
E L+ KIPIR+P +T +LE
Sbjct: 173 EPLEMKIPIRLPTGEVTTVFLE 194
>At3g45130.1 68416.m04871 cycloartenol synthase, putative /
2,3-epoxysqualene--cycloartenol cyclase, putative /
(S)-2,3-epoxysqualene mutase, putative 77% similar to
cycloartenol synthase [SP|P38605|gi:452446] [PMID:
7505443]; oxidosqualene cyclase LcOSC2 - Luffa
cylindrica, EMBL:AB033335
Length = 748
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 187 DNKRSWLYRIRPSVVHKPFKKLNIAKHFTHNWDGQEPDPNQSRWLPFDLP 336
++ RSW++ + + K ++ + W G P P + LP+ LP
Sbjct: 199 ESARSWIHHHGGATFIPSWGKFWLSVLGAYEWSGNNPLPPELWLLPYSLP 248
>At2g21720.1 68415.m02584 hypothetical protein contains Pfam
profile: PF04842 plant protein of unknown function
(DUF639)
Length = 703
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 98 YLLDKITRNVVRMGFTRNSCRAQRSLLHGMTINARG 205
Y+L+++ +++G TRN C A S+L M ++ G
Sbjct: 443 YVLEELAEISLKIGTTRNPCSAS-SILRNMNMDQLG 477
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/74 (18%), Positives = 35/74 (47%)
Frame = +1
Query: 7 SRLFRDMAELKYLSGFGSEFSSEDPRKPNALPVGQNNPQRCPYGLYAEQLSGTAFTAPRH 186
S+ F D+ ELK ++ + ++ R+ + + + P +++E + + +
Sbjct: 786 SQAFNDVLELKKMAKLVAPKRTKSSREWSNRDIIDEGSEMVPPAIHSEDIQNVSVDQVKD 845
Query: 187 DNKRSWLYRIRPSV 228
++RS YR+ +V
Sbjct: 846 TSRRSGHYRLHQTV 859
>At4g32890.1 68417.m04680 zinc finger (GATA type) family protein
GATA transcription factor 3, Arabidopsis thaliana,
gb:Y13650
Length = 308
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 22 DMAELKYLSGFGSE-FSSEDPRKPNALPVGQNNPQ 123
D+AEL++LS F E F+ ED K + L G NPQ
Sbjct: 76 DIAELEWLSNFVEESFAGEDQDKLH-LFSGLKNPQ 109
>At1g05920.1 68414.m00621 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 315
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 169 FTAPRHDNKRSWLYRIRPSVVHKPFKKLNIAKHFTHNWDGQEPDPNQSR 315
F P+H + WL ++ + KL I K N D + DP Q+R
Sbjct: 155 FVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEK----NLDSNDVDPRQNR 199
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,397,124
Number of Sequences: 28952
Number of extensions: 263811
Number of successful extensions: 764
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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