Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B24
         (214 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23AT6 Cluster: Putative uncharacterized protein; n=2; ...    33   1.7  
UniRef50_Q9G862 Cluster: SecY-independent transporter protein; n...    32   2.2  
UniRef50_Q4RWE1 Cluster: Chromosome 2 SCAF14990, whole genome sh...    31   3.9  
UniRef50_Q8IZF0 Cluster: Voltage gated channel-like protein 1; n...    31   3.9  
UniRef50_UPI00006CFEDF Cluster: hypothetical protein TTHERM_0071...    31   5.1  
UniRef50_Q4DX05 Cluster: Putative uncharacterized protein; n=2; ...    31   5.1  
UniRef50_Q8IBC7 Cluster: Putative uncharacterized protein MAL8P1...    31   6.7  
UniRef50_Q54SR3 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_P28540 Cluster: Preprotein translocase subunit secY; n=...    30   8.9  

>UniRef50_Q23AT6 Cluster: Putative uncharacterized protein; n=2;
            Alveolata|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 1428

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 123  VFYFTIFYTLIIYFMSFYFLLIIKKY 200
            +FY TIF   II+ +S Y +++I+KY
Sbjct: 1103 LFYLTIFIYFIIFSLSIYLIMLIQKY 1128


>UniRef50_Q9G862 Cluster: SecY-independent transporter protein; n=1;
           Malawimonas jakobiformis|Rep: SecY-independent
           transporter protein - Malawimonas jakobiformis
          Length = 251

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 126 FYFTIFYTLIIYFMSFYFLLIIKKYLVFF 212
           F+F +FY   IYF   +FL  I KY +FF
Sbjct: 222 FFFIVFYEFFIYF---FFLFNIYKYFIFF 247


>UniRef50_Q4RWE1 Cluster: Chromosome 2 SCAF14990, whole genome shotgun
            sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
            SCAF14990, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 1367

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 99   DCGHVN*AVFYFTIFYTLIIYFM-SFYFLLIIKKYLVFF 212
            DCG+   A+ YF  FY +I Y M +    +I++ + +F+
Sbjct: 1062 DCGNYAGALIYFCSFYVIIAYIMLNLLVAIIVENFSLFY 1100


>UniRef50_Q8IZF0 Cluster: Voltage gated channel-like protein 1; n=39;
            Coelomata|Rep: Voltage gated channel-like protein 1 -
            Homo sapiens (Human)
          Length = 1738

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 99   DCGHVN*AVFYFTIFYTLIIYFM-SFYFLLIIKKYLVFF 212
            DCG+   A+ YF  FY +I Y M +    +I++ + +F+
Sbjct: 1416 DCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFY 1454


>UniRef50_UPI00006CFEDF Cluster: hypothetical protein
           TTHERM_00715650; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00715650 - Tetrahymena
           thermophila SB210
          Length = 1612

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 123 VFYFTIFYTLIIYFMSFYFLLIIKKYLVFF 212
           VF+ TIF+ +I+ F+  Y +L I+K    F
Sbjct: 105 VFFMTIFFLVIVIFLLIYMILTIRKKAQIF 134


>UniRef50_Q4DX05 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 976

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 126 FYFTIFYTLIIYFMSFYFLLIIKKYLVFF 212
           +Y+  +Y L  +F  F+F++ ++K +VFF
Sbjct: 23  YYYHYYYYLFSFFFFFFFIICMEKRVVFF 51


>UniRef50_Q8IBC7 Cluster: Putative uncharacterized protein MAL8P1.6;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.6 - Plasmodium falciparum
           (isolate 3D7)
          Length = 224

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 123 VFYFTIFYTLIIYFMSFYFLLIIKKYLVF 209
           + Y  I++ +IIYF+ FY+   +K ++ F
Sbjct: 33  IIYIYIYFIIIIYFIYFYYFFKMKVFIFF 61


>UniRef50_Q54SR3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 223

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 123 VFYFTIFYTLIIYFMSFYFLLIIKK 197
           +FYF +F  ++ YF+ FYF+L   K
Sbjct: 56  LFYFILFCFILFYFILFYFILYFVK 80


>UniRef50_P28540 Cluster: Preprotein translocase subunit secY; n=1;
           Pavlova lutheri|Rep: Preprotein translocase subunit secY
           - Pavlova lutherii (Monochrysis lutheri)
          Length = 419

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 123 VFYFTIFYTLIIYFMSFYFLLII 191
           +FYF  F  LII+F  FY L+I+
Sbjct: 299 IFYFFTFLVLIIFFSFFYTLIIL 321


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,184,987
Number of Sequences: 1657284
Number of extensions: 2710689
Number of successful extensions: 6903
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6820
length of database: 575,637,011
effective HSP length: 49
effective length of database: 494,430,095
effective search space used: 10383031995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)