Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B24
         (214 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   0.31 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   0.31 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   2.2  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   2.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   2.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   5.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   5.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   5.1  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    19   5.1  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    19   6.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   6.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   6.7  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   8.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   8.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 0.31
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 106 PQSSCRIPCSPG 71
           P S+C +PC PG
Sbjct: 445 PISACSLPCEPG 456


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 0.31
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 106 PQSSCRIPCSPG 71
           P S+C +PC PG
Sbjct: 535 PISACSLPCEPG 546


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +3

Query: 87  IRHEDCGHVN*AVFYFT-IF-YTLIIY 161
           IR+EDCG    A+ Y + +F Y L+IY
Sbjct: 315 IRNEDCGS---AIAYVSDVFRYGLLIY 338


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +3

Query: 129 YFTIFYTLIIYFMSFYFLLIIKKYL 203
           +  ++Y +I+ +  FYF + ++  L
Sbjct: 72  WMNVYYIVILAWAIFYFFMSMRSEL 96


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 106 PQSSCRIPCSPG 71
           P+S C +PC  G
Sbjct: 583 PESVCSLPCEVG 594


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 70  GST*FLERPPTAXWSSS 20
           GST F ERP  A  S S
Sbjct: 465 GSTNFNERPAVAVVSKS 481


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 70  GST*FLERPPTAXWSSS 20
           GST F ERP  A  S S
Sbjct: 465 GSTNFNERPAVAVVSKS 481


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 70  GST*FLERPPTAXWSSS 20
           GST F ERP  A  S S
Sbjct: 465 GSTNFNERPAVAVVSKS 481


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 143 KYCEIKNRSIY 111
           KYCE    SIY
Sbjct: 65  KYCETYKNSIY 75


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 162 FMSFYFLLIIKKYLV 206
           F  F FL+++  Y+V
Sbjct: 66  FSVFSFLILVSSYIV 80


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 138 IFYTLIIYFMSFYFLLIIK 194
           I+Y +I+ +  FY L+ ++
Sbjct: 113 IYYIIILAWALFYLLVSLR 131


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 138 IFYTLIIYFMSFYFLLIIK 194
           I+Y +I+ +  FY L+ ++
Sbjct: 166 IYYIIILAWALFYLLVSLR 184


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 154 LSILCLFIFY 183
           +S LC+ +FY
Sbjct: 247 ISFLCVLVFY 256


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 123 PLNLHVHNPRAEF 85
           PL+LH+ N   E+
Sbjct: 681 PLDLHIQNAIREY 693


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,144
Number of Sequences: 438
Number of extensions: 933
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)