Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B23
(443 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr... 77 2e-15
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 33 0.026
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 29 0.32
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 29 0.42
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 29 0.42
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 28 0.56
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 1.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.7
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 26 3.0
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 26 3.0
SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 25 4.0
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 25 4.0
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 25 5.2
SPAC20G4.04c |hus1||checkpoint clamp complex protein Hus1|Schizo... 25 6.9
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 25 6.9
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 6.9
SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces pomb... 24 9.1
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 24 9.1
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 24 9.1
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 24 9.1
>SPAC3H8.07c |||prefoldin subunit 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 169
Score = 76.6 bits (180), Expect = 2e-15
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +3
Query: 51 VETSNPKSFSGIPEAVFVDNVDEFMNLPANSEGVDVVLKDLDEKHGKYKLMEYTLSTKRK 230
+ +SNP+ GIP A F EF L + E L+ E KYK ME ++ +
Sbjct: 1 MSSSNPR---GIPPAQFF----EFKEL--SMEEAQGHLEKFQEAIAKYKFMETSVVRRVA 51
Query: 231 RLRQQIPDLARSIEMIEKLKT-QKEEIETQFLLSDQVLLKANVPTTDIVYLWLGANVMLE 407
L +IPD+ ++++ ++ LK Q + + L+D + KA V D VYLWLGANVMLE
Sbjct: 52 SLDDKIPDIRKTLQSVQFLKERQGDSFTVTYELNDTLNAKAEVEAKDNVYLWLGANVMLE 111
Query: 408 YTLGDAEKLLS 440
YT+ +AE LL+
Sbjct: 112 YTVEEAEALLT 122
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 32.7 bits (71), Expect = 0.026
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +3
Query: 114 DEFMNLPANSEGVDVVLKDLDEKHGKYKLMEYTLSTKRKRLRQQIPDLARSIEMIEKLKT 293
DEF + ++E + LK L+ K + K ME + + +KR R + LAR +++K +
Sbjct: 70 DEFYDSMKSAEREQMELKRLESKDRRPKYMENLIESAKKRKRDLL--LARERALLKKNEL 127
Query: 294 QKEEIETQFLLS 329
+ ++ +F+ S
Sbjct: 128 EGDDATEKFVTS 139
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 29.1 bits (62), Expect = 0.32
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = -2
Query: 190 FPCFSSRSFNTT----STPSEFAGKFINSSTLSTKTASGIPENDLGFEVSTPSP 41
FP F TT PS FA + +S S + + DL EVS P+P
Sbjct: 556 FPDFDPDRITTTIEKPERPSRFARRLSSSVASDVDNLSQLHDTDLNSEVSAPAP 609
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 28.7 bits (61), Expect = 0.42
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 54 ETSNPKSFSGIPEAVFVDNVDEFMNLPANSEGVDVV 161
ETS P S S +P + +++ +EFM LP++ G+D +
Sbjct: 205 ETSGPAS-SVLPSSSQLESFNEFMFLPSSPPGLDEI 239
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 28.7 bits (61), Expect = 0.42
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 162 LKDLDEKHGKYKLMEYTLSTKRKRLRQQIP-DLARSIEMIEKLKTQKEEIETQFL--LSD 332
LK + KH K+ E ST L P + ++ + + L+ EE + FL L D
Sbjct: 221 LKAANNKHKYEKISEKKQSTSISELCAGFPNEFSKYMTYVRSLEFD-EEPDYAFLQELFD 279
Query: 333 QVLLKANVPTTDIVYLWLGAN 395
VL +AN T D VY W+ N
Sbjct: 280 DVL-RANGDTNDGVYDWMLLN 299
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 28.3 bits (60), Expect = 0.56
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 190 FPCFSSRSFNTTSTPSEFAGKFINSSTLSTKTASGIPE-NDLG 65
FP FS + N ++F G FI + ++ T G+ E DLG
Sbjct: 156 FPLFSELADNLIMPSTQFHGSFIYNQSIKTYELPGMKEFQDLG 198
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.1 bits (57), Expect = 1.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 117 EFMNLPANSEGVDVVLKDLDEKHGKYKLMEYTLSTKRKRLRQQIPDLARSI-EMIEKLKT 293
E ++ NS VLK +EK K TL + K LR QI + +I+KL+
Sbjct: 74 EMFSMDCNSICKSYVLKVAEEKIEKLLKENGTLKNEEKCLRMQIVAQEEYVAPLIQKLEI 133
Query: 294 QKEEIETQF 320
+++++ F
Sbjct: 134 IEKKLDKSF 142
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 1.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 162 LKDLDEKHGKYKLMEYTLSTKRKRLRQQIPDLARSIEMIEKLKTQKEEIETQ 317
L DL KH + +Y S + Q LA EM+E++KT+ +E Q
Sbjct: 921 LSDLQSKHTSLE-SQYNYSLRNIEQLQAASKLAE--EMVERVKTEYDEYRLQ 969
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 3.0
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +3
Query: 162 LKDLDEKHGKYKLMEYTLSTKRKRLRQQIPDLARSIEMIEKLKTQKEE 305
++DL E + K + +R+ + Q+ +++ ++ +EKL +K+E
Sbjct: 171 IQDLKELYEKSEHGAKNWERERETFQNQVSQMSKQLDSLEKLCERKDE 218
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 3.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 208 YSINLYFPCFSSRSFNTTSTPSEFAGKFINSSTLSTKTAS 89
+S++ P RS + +PS FA +NS+ ST S
Sbjct: 276 FSVSSDPPSTMGRSNSAVQSPSYFAHSLVNSTEFSTPNES 315
>SPBC19C7.06 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 716
Score = 25.4 bits (53), Expect = 4.0
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Frame = -2
Query: 169 SFNTTSTPSEFAGKFINSSTLSTKTAS------GIPENDLG-FEVSTPSPSIV 32
+ TTSTPS A K + S A GIP D+G F V+ + S V
Sbjct: 70 ALETTSTPSGIAAKAVGSKEARMAAADLVEEVFGIPPTDVGIFSVNKENASKV 122
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 25.4 bits (53), Expect = 4.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 144 EGVDVVLKDLDEKHGKYKLMEYTLSTKRKRLRQQIPDLARSIEMIEKLKTQ 296
E +D L++ DE+ +L+ L L Q +PD A I + +LKT+
Sbjct: 148 ENMDDALEEDDEEEAD-ELVNKVLDEIGVDLSQGLPDAATQIGTVPELKTE 197
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 25.0 bits (52), Expect = 5.2
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 42 GDGVETSNPKSFSGIPEAVFVDN-----VDEFMNLPANSEGVDVVLKDLDEKHGKYKLME 206
GD +T + S + E FV+ V + A SE DV LK++ +K+
Sbjct: 22 GDSTDTESSFSDADSSEEEFVEEKEASQVQSTKSKIATSESEDVTLKNIAKKN------- 74
Query: 207 YTLSTKRKRLRQQIPDLARSIEMIEKLKTQKEEIE 311
KR+R + IP + E IEK E+E
Sbjct: 75 -----KRERNDKLIPQQSNESEAIEKPVQSTTEVE 104
>SPAC20G4.04c |hus1||checkpoint clamp complex protein
Hus1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 287
Score = 24.6 bits (51), Expect = 6.9
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +3
Query: 246 IPDLARSIEMIEKLKTQKEEIETQFLLSDQVLLKANVPTTDIVYLWLG 389
+P L +++K K+ + I +S ++ L N+P+ + W G
Sbjct: 154 LPQLNFLRHVVDKYKSLSDRIIMSANMSGELQLSVNIPSARVSTKWKG 201
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 24.6 bits (51), Expect = 6.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -2
Query: 256 KSGIC*RRRFRFVDNVYSINLYFPCFSSRSFNTTSTPSE 140
++ +C R +FR ++ +++ CF + F T T E
Sbjct: 253 RAQLCMRNQFRSMNTDLCYAIHYACFVNPIFQNTDTEYE 291
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 24.6 bits (51), Expect = 6.9
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 135 ANSEGVD-VVLKDLDEKHGKYKLMEYTLSTKRKRLRQQIPDLARSIEMIEKLKTQKEEIE 311
A EG V+ ++ ++ + L TK +P ++ + + E + QKEEIE
Sbjct: 1190 AREEGSSQVIYQESKKRISNGSPTSWNLLTKPSPRSASLPKNSQPLSISEIMTEQKEEIE 1249
Query: 312 TQ 317
+Q
Sbjct: 1250 SQ 1251
>SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 24.2 bits (50), Expect = 9.1
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = -2
Query: 238 RRRFRFVDNVYSINLYFPCFSSRSFNTTSTP-SEFAGKFINSSTLSTKTASGIPENDLGF 62
+R+F F VY+I L C + NT S+ + SS LS+ I D
Sbjct: 185 KRKFGFETAVYAIGLLSACDKFETVNTFRLGLSKIVDEEFFSSVLSSSAQQLISLRDFYV 244
Query: 61 EVSTPSP 41
+ +P
Sbjct: 245 SIKPDNP 251
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 24.2 bits (50), Expect = 9.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 187 PCFSSRSFNTTSTPSEFAGKFINSSTLSTKTASGIPENDLGFEVSTPSPSI 35
P +S + T+ PS +NS T T SG+ + + STP PS+
Sbjct: 340 PSITSFDSSVTTVPSNSPAT-LNSYT--TSVPSGMSRHPMLMNPSTPEPSL 387
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 24.2 bits (50), Expect = 9.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 84 FLKMIWDSKFPLHHLPLFRTKVKSALP 4
FLK+ +S+ P +H PL+ ++ +LP
Sbjct: 242 FLKLN-ESEIPTYHYPLYTAELDPSLP 267
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 24.2 bits (50), Expect = 9.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 178 SSRSFNTTSTPSEFAGKFINSSTLSTKTAS 89
SS F+T T +++ +S+LST TA+
Sbjct: 109 SSEQFSTVFTLGHLGKEYLAASSLSTMTAA 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,700,583
Number of Sequences: 5004
Number of extensions: 30855
Number of successful extensions: 133
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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