Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B23
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.86 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   1.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.0  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.0  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -2

Query: 187 PCFSSRSFNTTSTPSEFAGKFINSSTLSTKTASGIPENDLGFEV 56
           P  S R  +  +T S        SST +T   SG P N +  +V
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMELQV 866


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 199 NLYFPCFSSRSFNTTSTPSEFAGKF 125
           NLY+   SS + N  +T     GKF
Sbjct: 261 NLYYSAMSSHNLNYVNTKQFTQGKF 285


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 231 RLRQQIPDLARSIEMIEKLKTQKEEIETQ 317
           RLR+ I  LAR ++ IE  K     +E++
Sbjct: 93  RLREGIGSLARILKTIENFKGTVTHVESR 121


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 226 RFVDNVYSINLYFPCFSSRSFNTTSTPSEFAGKF 125
           RF D +  +  Y+PC   +   T +TP+   G F
Sbjct: 474 RFYDGIRDMIGYYPCCWWKICWTITTPAICVGVF 507


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 226 RFVDNVYSINLYFPCFSSRSFNTTSTPSEFAGKF 125
           RF D +  +  Y+PC   +   T +TP+   G F
Sbjct: 527 RFYDGIRDMIGYYPCCWWKICWTITTPAICVGVF 560


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 54  ETSNPKSFSGIPEAVFVDNVDEFMNLPANS--EGVDVVLKDLDEK 182
           E S+  +  GI    FV +    +NLP N     V+  L+ ++E+
Sbjct: 376 EVSSTYTGFGIQSTDFVGDCSSLLNLPGNDARRRVEAALEAVEEE 420


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,305
Number of Sequences: 438
Number of extensions: 1980
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)