Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B20
(441 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 36 0.004
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 33 0.019
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 33 0.019
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 31 0.079
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.079
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 30 0.14
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 30 0.14
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.24
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 29 0.32
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 29 0.32
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.32
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.42
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 28 0.55
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 28 0.55
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 0.97
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 1.3
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 1.3
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 27 1.7
SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces... 27 1.7
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 1.7
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 2.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 2.2
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 2.2
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 26 3.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 3.0
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 26 3.0
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 26 3.0
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 25 3.9
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 25 3.9
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 25 3.9
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 5.2
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 25 5.2
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 6.8
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 25 6.8
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 6.8
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 25 6.8
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 25 6.8
SPAPB17E12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 9.0
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 24 9.0
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 24 9.0
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 35.5 bits (78), Expect = 0.004
Identities = 29/116 (25%), Positives = 56/116 (48%)
Frame = +2
Query: 53 KLHEQLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQT 232
KL E++ + +E A A+L E +E E S+ + A QL+ L+
Sbjct: 3 KLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEE 62
Query: 233 EREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQDLDNSEKVQQD 400
E +Q+R AD N+ I+ +TEA ++ +V L+++L+ ++K+ ++
Sbjct: 63 ETKQLRLKAD-----NEDIQ---------KTEAEQLSRKVELLEEELETNDKLLRE 104
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 33.1 bits (72), Expect = 0.019
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +2
Query: 116 ELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQ 295
EL + E T R +L S +L D +E+ D+L E+ R+L D ++ + +EQ
Sbjct: 358 ELESLRKETDTTSVERREKLES---KLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQ 414
Query: 296 LLEDKKRLQTEATEVRS 346
+ +R Q E R+
Sbjct: 415 ARIELERTQREGNYARA 431
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 33.1 bits (72), Expect = 0.019
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +2
Query: 134 LEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKK 313
++QATL H+R + + + ELR E L R+ R ++ EL ++ + + ++L + +
Sbjct: 203 VDQATLTHYRSDKERAEKIELR-VHESLKRISCIRSKVEELDQEITETARLQDELFKSTE 261
Query: 314 RLQTEATEVR 343
+ + +R
Sbjct: 262 EYEQQMITIR 271
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 31.1 bits (67), Expect = 0.079
Identities = 27/138 (19%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 2 EIINLPDTVEELQEHVLKLHEQLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNS 181
E+IN + EEL + L E+ Q + + +++++ + L + +
Sbjct: 283 ELINQIKSAEELDSAIQVLEERYRTMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEE 342
Query: 182 VRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRV--- 352
++L+ +E+ D L+ + E + EQL + + ++ +E+R V
Sbjct: 343 KESQLQLLKEKRDSLKYQVENQDISISEFEKMVSEREQLDRNLNMIGSKISELRKEVFDT 402
Query: 353 -AALQQDLDNSEKVQQDF 403
+Q +D+ EK Q F
Sbjct: 403 DLLIQASIDSLEKKVQKF 420
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.1 bits (67), Expect = 0.079
Identities = 20/88 (22%), Positives = 44/88 (50%)
Frame = +2
Query: 125 AQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLE 304
A+ L+ L +++ ++ +L D +++LD + ERE+ KL S E +
Sbjct: 649 AKDLDNTNLMEILNDKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSAS---FELMSN 705
Query: 305 DKKRLQTEATEVRSRVAALQQDLDNSEK 388
+K+ L+ + + +++ + Q LD E+
Sbjct: 706 EKQALELKYSSLKNELINAQNLLDRREE 733
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 30.3 bits (65), Expect = 0.14
Identities = 17/72 (23%), Positives = 40/72 (55%)
Frame = +2
Query: 161 REAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEV 340
++A+L+ + E RD D L T + +L + + H + M+E ++ + L+ +A ++
Sbjct: 709 QKAQLSLKQFE-RDHIPLKDELVTITGETTDLQESMHHKSRMLELVVLELHTLEQQANDL 767
Query: 341 RSRVAALQQDLD 376
+S +++ +LD
Sbjct: 768 KSELSSEMDELD 779
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 30.3 bits (65), Expect = 0.14
Identities = 25/125 (20%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Frame = +2
Query: 26 VEELQEHVLKLHEQLIFCQIG--------REEGAATEGELR---AQLLEQATLFHHREAE 172
+ EL E +++L ++L+ Q REE A+ + + R +QL + + E+E
Sbjct: 1002 IRELNEKLMRLDDELLLKQRSYDTKVQELREENASLKDQCRTYESQLASLVSKYSETESE 1061
Query: 173 LNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRV 352
LN EL ++++ + + + + +K + ND+ L + + + ++ S +
Sbjct: 1062 LNKKEAELVIFQKEITEYRDQLHKAFQNPEKTHNINDVKSGPLNSDENIYSTSSTTLSIL 1121
Query: 353 AALQQ 367
+Q+
Sbjct: 1122 KDVQE 1126
Score = 27.9 bits (59), Expect = 0.73
Identities = 25/114 (21%), Positives = 50/114 (43%)
Frame = +2
Query: 38 QEHVLKLHEQLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQL 217
+E L+LH QL Q +++ +L + +T R + E A +
Sbjct: 1928 REENLQLHRQLGVLQKEKKDLELKLFDLDLKTYPISTSKDVRMLQKQISDLEASFAASDI 1987
Query: 218 DRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQDLDN 379
+R++ ++ R +R I + +DKKR+Q+ + + R A L+ L++
Sbjct: 1988 ERIKGI-DECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLED 2040
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.5 bits (63), Expect = 0.24
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +2
Query: 29 EELQEHVLKLHEQLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAR 208
EE +E V + L+ + EEG A+L EQ L +RE + +L +
Sbjct: 517 EEDEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEI 576
Query: 209 EQLDRLQTERE--QMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQDLDNS 382
E+ ++ + ERE ++RE +K R + +L ++++R + EA + + A +
Sbjct: 577 EEENKRKQERELKKIRE-KEKKRDKKKQL-KLAKEEERQRREAERLAEQAAQKALEAKRQ 634
Query: 383 EKVQQ 397
E+ ++
Sbjct: 635 EEARK 639
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 29.1 bits (62), Expect = 0.32
Identities = 25/108 (23%), Positives = 49/108 (45%)
Frame = +2
Query: 80 QIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELA 259
+IGR A G + ++ ++ + H+ L S + + L RL+ ++ ++ +
Sbjct: 413 RIGRTARAGKPGTAMSFVVPKSEVGKHKPTSLESCKKD----ESVLRRLEKKQISLQPYS 468
Query: 260 DKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQDLDNSEKVQQDF 403
++ D +ED R T +R A L+Q+L SEK++ F
Sbjct: 469 FD-KNQIDAFRYRMEDALRAVTTVAVSAARAAELKQELLISEKLKSYF 515
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 29.1 bits (62), Expect = 0.32
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
Frame = +2
Query: 158 HREAELNSVRTELRDAR--------EQLDRLQTEREQMRELADKLRH 274
HR+A+ ++RT +DAR EQ + Q E+MR+L ++L+H
Sbjct: 776 HRDAKKGAIRTLRKDARFIARERRQEQRAKDQAYNEKMRKLENRLQH 822
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.32
Identities = 21/92 (22%), Positives = 40/92 (43%)
Frame = +2
Query: 110 EGELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMI 289
E +LRA L + + A ++ EL + REQ+ + E + L+
Sbjct: 464 EQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQ------ 517
Query: 290 EQLLEDKKRLQTEATEVRSRVAALQQDLDNSE 385
+L +KK+ + +++ LQ ++ NSE
Sbjct: 518 RDILNEKKKHEVYESQLNELKGELQTEISNSE 549
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 0.42
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 218 DRLQTE---REQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVR 343
DR+ TE +Q+R KL SN+ + L +++K L+ E ++++
Sbjct: 54 DRIVTEVNYEQQLRNSEKKLLQSNERYDLLEDERKLLENELSQIK 98
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 0.55
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +2
Query: 83 IGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMR-ELA 259
I G + E A + +L + + EL+ ++Q+ +L +R+Q R E+
Sbjct: 419 ISPTSGTPSNLEKGAGNVPDVSLLEQLATTIRRLEAELQTTKQQVAQLIIQRDQARQEIV 478
Query: 260 DKLRHSN---DMIEQLLEDKKRLQTEATEVRSRVAALQQDLDNSEKVQQD 400
D +++ D +Q+ E + +LQ E S + L+Q D +++ D
Sbjct: 479 DAYVNNDANEDSKKQVEELRLQLQNLEKEHASTLVTLKQKSDKVFELELD 528
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 28.3 bits (60), Expect = 0.55
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 173 LNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRV 352
+N V+ +R+ D+ REQ + DK+++ D + E K++LQ E +S
Sbjct: 181 VNKVKQNMRNGASARDQA---REQGSKAKDKIKNDPDAQKAKEETKQKLQDLYEEFKSVA 237
Query: 353 AALQQD 370
LQ D
Sbjct: 238 VDLQGD 243
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.5 bits (58), Expect = 0.97
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 131 LLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDK 310
+LEQ+ L H + L + +L+ ++L ++E E + +A +L +++ + LE +
Sbjct: 294 VLEQSDLLHKKHQMLIQLENDLQFREQRLSARESELENV--IASRLAQREEILRRELEKQ 351
Query: 311 KR 316
R
Sbjct: 352 LR 353
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.1 bits (57), Expect = 1.3
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 4/132 (3%)
Frame = +2
Query: 23 TVEELQEHVLKLHEQLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRD 202
T + ++ +K+ EQL F ++ + L + E + + + +E+ D
Sbjct: 427 TRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSEAENSLSSHDIDSQKLNSEIAD 486
Query: 203 AREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATE----VRSRVAALQQD 370
RLQ E + ++ L+ + I +E+K++ A E + S LQ +
Sbjct: 487 LSL---RLQQEELSLDDIRKSLQGKTEGISNAIEEKQKAMAPALEKINQLTSEKQILQVE 543
Query: 371 LDNSEKVQQDFV 406
LD + D +
Sbjct: 544 LDMLLNKENDLI 555
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.1 bits (57), Expect = 1.3
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +2
Query: 92 EEGAATEGELRAQLLEQATLFHHREAELNSVR-TELRDAREQLDRLQTEREQ--MRELAD 262
EE A E E +A+ +A REAE + R E + RE ++ + E E+ RE +
Sbjct: 614 EEKAKREAEEKAK--REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEE 671
Query: 263 KL-RHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQDLDNSEKVQ 394
K R + + ++ E+K + +TE R +++ D + +++
Sbjct: 672 KAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIK 716
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 26.6 bits (56), Expect = 1.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 161 REAELNSVRTELRDAREQLDRLQTEREQMRE 253
+ AELNSV ++L + R L+ E E +++
Sbjct: 555 KNAELNSVNSKLSEGRAHLETANKENEILKQ 585
>SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 118
Score = 26.6 bits (56), Expect = 1.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 287 IEQLLEDKKRLQTEATEVRSRVAALQQDLDNSEKVQQDFV 406
+ Q+ +D+K Q +T R R+ +++ N EKV D V
Sbjct: 1 MSQVAKDQKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLV 40
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 1.7
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +1
Query: 121 PSTTPRAGDALPPPGGGTEQRQNRVEGRQGTAGQAADGTRADARVGRQVATL*RHDRTVA 300
PST P + P GGT E A D ++ ++V+ +HD+ A
Sbjct: 424 PSTIPTESEN-PVAVGGTTAEHPVQEAVTAPTETAHDFSKETTTASKRVS---KHDKASA 479
Query: 301 RRQKTPAD*SDRGEEP 348
+ K S G+EP
Sbjct: 480 EKHKVARKPSSTGQEP 495
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -2
Query: 347 GSSPRSLQSAGVFCLRATVRSCR*SVATCRPTRAS 243
GSSP SL + A + SC S TCRP R S
Sbjct: 8 GSSPTSLSVSEKI---AKLESCNDSRITCRPVRES 39
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 2.2
Identities = 22/96 (22%), Positives = 43/96 (44%)
Frame = +2
Query: 116 ELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQ 295
EL ++LLE+ + +E N ++ +L + E+ D L T+ E + LR +N +
Sbjct: 919 ELESELLEKTSKVETLLSEQNELKEKL--SLEEKDLLDTKGE-----LESLRENNATV-- 969
Query: 296 LLEDKKRLQTEATEVRSRVAALQQDLDNSEKVQQDF 403
L +K + ++ + +LD K D+
Sbjct: 970 -LSEKAEFNEQCKSLQETIVTKDAELDKLTKYISDY 1004
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 2.2
Identities = 17/82 (20%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Frame = +2
Query: 173 LNSVRTELRDAREQL----DRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEA--- 331
+ ++ E+ + R L +T RE+ ++ KL + + +LL+ + ++QTE
Sbjct: 385 ITKLQNEIDECRRNLLWAESSCETIREENQKNIKKLNDAESLKSRLLQSRTQMQTELDSY 444
Query: 332 ----TEVRSRVAALQQDLDNSE 385
++++ + +L+Q + SE
Sbjct: 445 ITSNSQLKDEITSLKQTVSESE 466
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 25.8 bits (54), Expect = 3.0
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Frame = +2
Query: 20 DTVEELQEHVLKLHE---QLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNSVRT 190
D L +L+ E Q + + +E + E EL A+ ++ +A+ R
Sbjct: 243 DIAHALDRDILERDEIVLQFPYTEAAAQEKSQEELELIAERKRESG--RRLQAQAAIKRK 300
Query: 191 ELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQD 370
E R++ TE +Q + + + E ED+ +L + V++++ Q+D
Sbjct: 301 EKAAERDRELATLTELQQQSLVLSRRAFQRALEEAGFEDESQLNAQVKNVQAKIRRAQRD 360
Query: 371 LDNSEK 388
E+
Sbjct: 361 QQRQEE 366
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 3.0
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = +2
Query: 155 HHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEAT 334
+H ++ ++ E + + D+L +++ L+ + +E L+ +KK L+
Sbjct: 794 NHLVQQIRKLKDENKKDQSGTDKLM---KKIYHCEQSLKEKTNSLETLVSEKKELKNLLD 850
Query: 335 EVRSRVAALQQDLDN 379
R A+Q +L+N
Sbjct: 851 AERRSKKAIQLELEN 865
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 25.8 bits (54), Expect = 3.0
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 209 EQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQD 370
+QLD L + + + + K++ D++EQ L+ L + TEV S +L +
Sbjct: 163 KQLDLLSSNMKTLMKEKTKVQGQRDLLEQRLQG---LMKKLTEVESLTVSLNDE 213
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 3.0
Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 128 QLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHS-NDMIEQLLE 304
Q + L H E+ ++ E + + L++ Q E R ++L H +D ++++
Sbjct: 55 QSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEINS 114
Query: 305 DKKRLQTEATEVRSRVAALQQD 370
+LQ + + A+ Q+
Sbjct: 115 LNSQLQIQKSNPEKHEDAVSQN 136
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 25.4 bits (53), Expect = 3.9
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +2
Query: 185 RTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKR----LQTEA-TEVRSR 349
R LRD++E +LQT E+ + + ++I + +++K ++ E+ +E + R
Sbjct: 227 REALRDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKTETDYMKKESLSEQKER 286
Query: 350 VAALQQDLDNSEKV 391
A ++ ++ EKV
Sbjct: 287 GAFMESNMILEEKV 300
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 3.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 357 AATRLLTSVASVCRRFLSSSNCSIMSLECRNLSA 256
+ T L TS S + ++ C I LE NLSA
Sbjct: 20 SGTNLSTSAQSDSSNIVKATECPICGLELPNLSA 53
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +2
Query: 200 DARE-QLDRLQTEREQMRELADKLRHSNDMIEQLLED---KKRLQTEATEVRSRVAALQQ 367
++RE + RLQ R+++ + +K+R ++ I+ L K+ + + ++ R + +LQ
Sbjct: 35 ESREIEKKRLQKVRKEISSVKEKIRRLDERIDSRLTKISVKENFRKQLSKFRDTLQSLQS 94
Query: 368 D 370
D
Sbjct: 95 D 95
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.0 bits (52), Expect = 5.2
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +2
Query: 164 EAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIE 292
E+E+N+ ++ + DRL+ E+ + L ND I+
Sbjct: 901 ESEINNGELTIQKLNHEFDRLEREKSVAITAINHLEKENDWID 943
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 5.2
Identities = 13/65 (20%), Positives = 31/65 (47%)
Frame = +2
Query: 101 AATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSN 280
++ + + + ++ + ++ +L +L D REQL +T+R EL + ++
Sbjct: 575 SSLDKDFQDEMAAKQSMIDSAYTQLRESTKKLSDLREQLHVSETQRTLFLELRQRCKNLM 634
Query: 281 DMIEQ 295
IE+
Sbjct: 635 TSIEE 639
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 24.6 bits (51), Expect = 6.8
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = +2
Query: 80 QIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQLD----RLQTEREQM 247
QI + + A +E + QA ++ L ++ D+REQL+ L +Q+
Sbjct: 152 QIEKNDQALSEKNHEVMVSNQA--LQMKDTNLTNLEKLFADSREQLETKCKELAAAEQQL 209
Query: 248 RELADKLRHSNDMIEQLLEDKKRLQTEATEVRSRVAALQQ 367
+EL+ + + I+Q + L+ E R +++ L++
Sbjct: 210 QELSVHNQQLEESIKQ-VSSSIELEKINAEQRLQISELEK 248
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 24.6 bits (51), Expect = 6.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 23 TVEELQEHVLKLHEQLIFCQIGREEGAATEGELRAQLLEQATLFHHREAELNS 181
T ++LQ HV + HE++I E EG + L+ H REA + S
Sbjct: 157 TKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQN----HIREAHVPS 205
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 24.6 bits (51), Expect = 6.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 396 CCTFSLLSRSCCSAATRLLTSVASVCRRFLSSSN 295
CC +SR +++ T ++ R +SSSN
Sbjct: 1187 CCMSDFVSRVEGENTSKIFTEISKFVREIISSSN 1220
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 24.6 bits (51), Expect = 6.8
Identities = 20/88 (22%), Positives = 36/88 (40%)
Frame = +2
Query: 80 QIGREEGAATEGELRAQLLEQATLFHHREAELNSVRTELRDAREQLDRLQTEREQMRELA 259
+I ++E + E Q EQ +E EL ++ RLQ ++ + E
Sbjct: 89 RIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRKEERD 148
Query: 260 DKLRHSNDMIEQLLEDKKRLQTEATEVR 343
KLR + Q L ++ L E +++
Sbjct: 149 QKLREKEE--AQRLRQEQILNKERQQLK 174
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 24.6 bits (51), Expect = 6.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 146 TLFHHREAELNSVRTELRDAREQLD----RLQTEREQMRELADKLRHSNDMIEQLLEDKK 313
+L R +N+V + L + RE++ R T + R RHS E+L+EDKK
Sbjct: 923 SLSRRRNDYINNVTSWLDERREKMGVVRPRASTSILETRRRPAVGRHSLAGGERLMEDKK 982
Query: 314 RLQTE 328
L +
Sbjct: 983 YLSKQ 987
>SPAPB17E12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 203
Score = 24.2 bits (50), Expect = 9.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 167 AELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLEDKKRLQTE 328
A L ++ D R + + QTE+E +RE++ + +E+ L D K E
Sbjct: 116 AVLQMAVSDTDDPRLKEEYKQTEKELLREISGNHKSKILKLEEELNDLKHSMKE 169
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 24.2 bits (50), Expect = 9.0
Identities = 13/75 (17%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 155 HHREAELNSVRTELRDAREQLDRLQTEREQMRELADKLRHSNDMIEQLLED-KKRLQTEA 331
H R +L + + + + RE+ + ER + + +K +M EQ + ++ L+++
Sbjct: 352 HSRNQKLEAAKQRMDNIREEYKVITQERNKKIQETEKKNAMIEMTEQKIAGMREELESQI 411
Query: 332 TEVRSRVAALQQDLD 376
+ + L+ ++
Sbjct: 412 SSITMEFEKLKSHVE 426
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 24.2 bits (50), Expect = 9.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 98 GAATEGELRAQLLEQATLFHHREA 169
GA T AQLL Q ++H+E+
Sbjct: 714 GAGTSNARLAQLLRQLASYYHKES 737
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,215,553
Number of Sequences: 5004
Number of extensions: 18079
Number of successful extensions: 127
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -