Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B17
         (186 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   6.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    19   6.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    19   6.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    18   8.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    18   8.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    18   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 102 YDCFSNDYSNSG 137
           YDC SN   N G
Sbjct: 378 YDCDSNPCQNGG 389



 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 105 DCFSNDYSNSG 137
           +C SN  SN+G
Sbjct: 301 ECLSNPCSNAG 311


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 112  FLMTIQIQVIKIFLL 156
            FLM   + VI IFLL
Sbjct: 1229 FLMLNSLYVIVIFLL 1243


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 112  FLMTIQIQVIKIFLL 156
            FLM   + VI IFLL
Sbjct: 1229 FLMLNSLYVIVIFLL 1243


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = +1

Query: 85  IKYNFCMTV------FLMTIQIQVIKIFLLI*N 165
           I+Y+ C TV      F+M + +++ + F ++ N
Sbjct: 156 IQYHICNTVISATVCFMMLLMLEIWRRFTILNN 188


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = +1

Query: 85  IKYNFCMTV------FLMTIQIQVIKIFLLI*N 165
           I+Y+ C TV      F+M + +++ + F ++ N
Sbjct: 152 IQYHICNTVISATVCFMMLLMLEIWRRFTILNN 184


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 55  VCVLNNNVKHIKYNF 99
           VC LN ++  I +NF
Sbjct: 60  VCCLNLSIVTIFFNF 74


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 41  INSITLF*KKKK 6
           +NS+TL  K+KK
Sbjct: 150 VNSLTLTLKRKK 161


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 41  INSITLF*KKKK 6
           +NS+TL  K+KK
Sbjct: 76  VNSLTLTLKRKK 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,561
Number of Sequences: 336
Number of extensions: 347
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 41
effective length of database: 108,809
effective search space used:  2176180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)