Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B15
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              35   5e-04
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   3.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.4  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   5.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.1  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    21   9.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 35.1 bits (77), Expect = 5e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +3

Query: 138 CARNLRPVCGSDGKTYHNQCLLYCERDKTHSDLKIVK 248
           C R  RPVC S+GK Y N C L+  R   HS   + K
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTK 144



 Score = 30.3 bits (65), Expect = 0.015
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
 Frame = +3

Query: 348 ECSRPLAPSLEMKHRG---ECQEVKVADIQPCICTREI----KQVCGSDGVTYGNPCLLN 506
           E SR + P    K+ G   EC+    + I  C+C R+     + VC S+G  Y N C L+
Sbjct: 74  ESSRSIDPCAS-KYCGIGKECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELH 132

Query: 507 -CATQSNPSLS 536
             A  S  SL+
Sbjct: 133 RAACHSGSSLT 143



 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 282 CTFIYAPVCGTDGNTYPNKCSL 347
           C   + PVC ++G  Y N C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 315 DGNTYPNKCSLECSRPLAPSLEMKHR 392
           DGN+Y N     CSR  +   + K R
Sbjct: 241 DGNSYRNDGERSCSRDRSREYKKKDR 266


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 324 CSRLCHRPGHI*RY-RRKDRLPHTY 253
           C RLC+R G + R+    + +P  Y
Sbjct: 247 CERLCNRLGRVKRFINWHEPIPEAY 271


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -3

Query: 579 PQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 487
           P PS  CR         SGS +W+      C
Sbjct: 47  PIPSYACRGRCSSYLQVSGSKIWQMERSCMC 77


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 415 TLTSWHSPRCFIS 377
           T  SWHSP   IS
Sbjct: 152 TEASWHSPEAHIS 164


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 264 PHTYPLSRFSNRCASCPSRNTR 199
           P  YPL RF N     P R+ R
Sbjct: 67  PSVYPLLRFENPETHHPIRHGR 88


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 14/65 (21%), Positives = 23/65 (35%)
 Frame = +3

Query: 171 DGKTYHNQCLLYCERDKTHSDLKIVKEGTCEEADPCVCTFIYAPVCGTDGNTYPNKCSLE 350
           DGK  H+       +  + S  +  +     + DP   + + A + GT     P  C   
Sbjct: 432 DGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCLPP 491

Query: 351 CSRPL 365
              PL
Sbjct: 492 REAPL 496


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/54 (20%), Positives = 24/54 (44%)
 Frame = -1

Query: 608 ITLLDSGWFFHNLHSVVARTRVFDAQARVRLCGAIQQARVAVSDAVATANLFDL 447
           I  + + W     HS+     + D Q  + +   I++A+  V + +  A+  +L
Sbjct: 133 IQTVXNNWLLLEGHSIGIGDTIADPQTYLEIQKXIKKAKEDVIEVIQKAHNMEL 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,624
Number of Sequences: 438
Number of extensions: 3923
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)