Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B13
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82096-7|CAB05033.2|  332|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z66519-6|CAA91374.3|  394|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z82096-7|CAB05033.2|  332|Caenorhabditis elegans Hypothetical
           protein ZK909.5 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 330 YSAKDYDTFYKTTVYMKDRVNQDLYIYVLST 422
           YS   Y   +K+ +Y K+R NQ+ YI V+ +
Sbjct: 69  YSETQYWYTFKSDIYRKERTNQEGYIEVMKS 99


>Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical
           protein F53C11.1 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 240 KQNWLLPLSVPFSPLNPTHQFEAVIMFNV 326
           KQN+     V F+PL PTH +  V+ ++V
Sbjct: 280 KQNFPGEKFVSFTPLTPTHAYSNVLAYSV 308


>Z66519-6|CAA91374.3|  394|Caenorhabditis elegans Hypothetical
           protein B0334.6 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +3

Query: 258 PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHR 437
           PLS+P    + +  F       VLY      TFYK++V +    N + Y+ V+  L+ HR
Sbjct: 102 PLSIPSLAFSTS--FNHFYSRIVLYIRTLASTFYKSSVLIVVAFNIERYLCVVCPLNSHR 159


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 175  LQLAEIVIDFET*FGSRA-WKYNKEISIC 92
            +Q  +I+ DFE  FGSR  WK   E  IC
Sbjct: 1296 VQKFQIISDFENYFGSRGLWKNYLEAMIC 1324


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 175  LQLAEIVIDFET*FGSRA-WKYNKEISIC 92
            +Q  +I+ DFE  FGSR  WK   E  IC
Sbjct: 1296 VQKFQIISDFENYFGSRGLWKNYLEAMIC 1324


>U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical
           protein C26F1.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = -1

Query: 232 KIHIFTAVSFL*WFILFSILQLAEIVIDFET*FGSRAWKYNKEISICFFANSTESSVLTG 53
           K+ I   + FL  +I   IL + EI +D ET  G   W  N   ++    NST + V   
Sbjct: 228 KMMIMVVLVFLVCYIFSFILNIWEI-LDKETFGGDIGWFMNDINNVLIVVNSTSAIVFYY 286

Query: 52  SHNPGAKMSANT 17
            ++   +  A T
Sbjct: 287 KYSTRFRNQART 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,007,182
Number of Sequences: 27780
Number of extensions: 299848
Number of successful extensions: 778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)