Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B11
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +2

Query: 233 INKKQNTWKAGRNFPTHTPFAHIKI 307
           +N +  TW  GR      PF  + +
Sbjct: 129 VNSRPETWVLGREMCKAVPFVELTV 153


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +2

Query: 233 INKKQNTWKAGRNFPTHTPFAHIKI 307
           +N +  TW  GR      PF  + +
Sbjct: 129 VNSRPETWVLGREMCKAVPFVELTV 153


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 112 LQSRSVNKLTRNSNECSAITEQH 44
           L    +N    N N  SA+T QH
Sbjct: 367 LSQSGINYKDTNDNNVSAVTTQH 389


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 188 PQQREYTRARRTEHTKEPSFSILFSFTESI 99
           P   E + +    H+ E SFS   S+T +I
Sbjct: 194 PTCSEASSSPTPSHSSESSFSAASSYTNTI 223


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 482 SESPAAAARSLIPNLVQCRAFGATYPSGRNSLEGLL 375
           SE+   ++ S  P +  CR F A         +GL+
Sbjct: 51  SENSEVSSNSYTPKIKSCRPFKAYIKDPLTLAQGLV 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,341
Number of Sequences: 336
Number of extensions: 2873
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)