Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B11
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01610.1 68417.m00210 cathepsin B-like cysteine protease, put... 58 6e-09
At1g02305.1 68414.m00175 cathepsin B-like cysteine protease, put... 56 2e-08
At4g01610.2 68417.m00211 cathepsin B-like cysteine protease, put... 52 3e-07
At1g02300.1 68414.m00173 cathepsin B-like cysteine protease, put... 45 3e-05
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 41 7e-04
At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol p... 38 0.007
At4g36880.1 68417.m05229 cysteine proteinase, putative strong si... 38 0.007
At3g19400.2 68416.m02460 cysteine proteinase, putative non-conse... 38 0.007
At3g19400.1 68416.m02461 cysteine proteinase, putative non-conse... 38 0.007
At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XC... 38 0.007
At4g23520.1 68417.m03390 cysteine proteinase, putative contains ... 37 0.009
At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol pro... 37 0.009
At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3) ... 37 0.012
At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XC... 36 0.020
At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XC... 36 0.020
At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG1... 36 0.027
At1g06260.1 68414.m00662 cysteine proteinase, putative contains ... 36 0.027
At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thi... 34 0.063
At4g11310.1 68417.m01827 cysteine proteinase, putative contains ... 34 0.063
At3g54940.3 68416.m06091 cysteine proteinase, putative contains ... 34 0.063
At3g54940.2 68416.m06090 cysteine proteinase, putative contains ... 34 0.063
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 34 0.083
At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP pr... 33 0.11
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 33 0.11
At4g16190.1 68417.m02457 cysteine proteinase, putative contains ... 33 0.11
At3g48350.1 68416.m05277 cysteine proteinase, putative similar t... 33 0.14
At1g29080.1 68414.m03560 peptidase C1A papain family protein con... 33 0.14
At2g21430.1 68415.m02550 cysteine proteinase A494, putative / th... 33 0.19
At3g43960.1 68416.m04706 cysteine proteinase, putative contains ... 32 0.25
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 32 0.33
At2g27420.1 68415.m03314 cysteine proteinase, putative contains ... 32 0.33
At3g45310.1 68416.m04892 cysteine proteinase, putative similar t... 31 0.44
At1g29090.1 68414.m03561 peptidase C1A papain family protein con... 31 0.44
At3g49340.1 68416.m05394 cysteine proteinase, putative contains ... 30 1.3
At1g11950.1 68414.m01381 transcription factor jumonji (jmjC) dom... 27 7.2
At2g26510.1 68415.m03181 xanthine/uracil permease family protein... 27 9.5
>At4g01610.1 68417.m00210 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 57.6 bits (133), Expect = 6e-09
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3
Query: 417 PECPTLNEIRDQGSCGSCWAFGAVEAMTDRVCI 515
P+C ++ I DQG CGSCWAFGAVE+++DR CI
Sbjct: 114 PQCTSIGNILDQGHCGSCWAFGAVESLSDRFCI 146
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 209 LSDAFINLINKKQNT-WKAGRNFP-THTPFAHIKILMGA--LKDDNILKLPKVTHDAELI 376
L D + +N+ N WKA N ++ A K L+G + L +P V+HD L
Sbjct: 43 LQDEIVKKVNENPNAGWKAAINDRFSNATVAEFKRLLGVKPTPKKHFLGVPIVSHDPSL- 101
Query: 377 ANLPENFDPRDKWPR 421
LP+ FD R WP+
Sbjct: 102 -KLPKAFDARTAWPQ 115
>At1g02305.1 68414.m00175 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
[Nicotiana rustica] GI:609175; contains Pfam profile
PF00112: Papain family cysteine protease
Length = 362
Score = 55.6 bits (128), Expect = 2e-08
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +3
Query: 420 ECPTLNEIRDQGSCGSCWAFGAVEAMTDRVCIYSN 524
+C ++ I DQG CGSCWAFGAVE+++DR CI N
Sbjct: 118 QCTSIGRILDQGHCGSCWAFGAVESLSDRFCIKYN 152
Score = 32.7 bits (71), Expect = 0.19
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +2
Query: 209 LSDAFINLINKKQNT-WKAGRNFP-THTPFAHIKILMGA--LKDDNILKLPKVTHDAELI 376
L + + +N+ N WKA N + A K L+G L +P V+HD L
Sbjct: 46 LQNEIVKEVNENPNAGWKASFNDRFANATVAEFKRLLGVKPTPKTEFLGVPIVSHDISL- 104
Query: 377 ANLPENFDPRDKWPRMPYIER 439
LP+ FD R W + I R
Sbjct: 105 -KLPKEFDARTAWSQCTSIGR 124
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +1
Query: 547 SAEDLVSCCP-ICGLGCNG 600
S DL++CC +CG GCNG
Sbjct: 158 SVNDLLACCGFLCGQGCNG 176
>At4g01610.2 68417.m00211 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]; contains an
unusually short, 5nt exon
Length = 359
Score = 52.0 bits (119), Expect = 3e-07
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 417 PECPTLNEIRDQGSCGSCWAFGAVEAMTDRVCI 515
P+C ++ I G CGSCWAFGAVE+++DR CI
Sbjct: 114 PQCTSIGNILGLGHCGSCWAFGAVESLSDRFCI 146
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 209 LSDAFINLINKKQNT-WKAGRNFP-THTPFAHIKILMGA--LKDDNILKLPKVTHDAELI 376
L D + +N+ N WKA N ++ A K L+G + L +P V+HD L
Sbjct: 43 LQDEIVKKVNENPNAGWKAAINDRFSNATVAEFKRLLGVKPTPKKHFLGVPIVSHDPSL- 101
Query: 377 ANLPENFDPRDKWPR 421
LP+ FD R WP+
Sbjct: 102 -KLPKAFDARTAWPQ 115
>At1g02300.1 68414.m00173 cathepsin B-like cysteine protease,
putative similar to cathepsin B-like cysteine proteinase
GI:609175 from [Nicotiana rustica]
Length = 379
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 453 GSCGSCWAFGAVEAMTDRVCIYSN 524
G CGSCWAFGAVE+++DR CI N
Sbjct: 146 GHCGSCWAFGAVESLSDRFCIKYN 169
Score = 33.9 bits (74), Expect = 0.083
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +2
Query: 209 LSDAFINLINKKQNT-WKAGRNFP-THTPFAHIKILMGALKDDNI--LKLPKVTHDAELI 376
L + + +N+ N WKA N + A K L+G ++ L +P V HD L
Sbjct: 43 LQNEIVKEVNENPNAGWKAAFNDRFANATVAEFKRLLGVIQTPKTAYLGVPIVRHDLSL- 101
Query: 377 ANLPENFDPRDKWPRMPYIER 439
LP+ FD R W I R
Sbjct: 102 -KLPKEFDARTAWSHCTSIRR 121
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +1
Query: 547 SAEDLVSCCPI-CGLGCNG 600
SA D+++CC + CG GCNG
Sbjct: 175 SANDVIACCGLLCGFGCNG 193
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 40.7 bits (91), Expect = 7e-04
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+N ++DQGSCGSCWAF A+ A+
Sbjct: 141 VNPVKDQGSCGSCWAFSAIGAV 162
>At5g43060.1 68418.m05256 cysteine proteinase, putative / thiol
protease, putative similar to cysteine proteinase RD21A
precursor (thiol protease) GI:435619, SP:P43297 from
[Arabidopsis thaliana]
Length = 463
Score = 37.5 bits (83), Expect = 0.007
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 438 EIRDQGSCGSCWAFGAVEAM 497
+++DQGSCGSCWAF + A+
Sbjct: 152 DVKDQGSCGSCWAFSTIGAV 171
>At4g36880.1 68417.m05229 cysteine proteinase, putative strong
similarity to cysteine proteinase COT44 precursor
SP:P25251 from [Brassica napus] (Rape)
Length = 376
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+N I+DQG+CGSCWAF A+
Sbjct: 157 VNPIKDQGTCGSCWAFSTTAAV 178
>At3g19400.2 68416.m02460 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 290
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++DQG+CGSCWAF AV A+
Sbjct: 145 VKDQGNCGSCWAFSAVGAV 163
>At3g19400.1 68416.m02461 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 362
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++DQG+CGSCWAF AV A+
Sbjct: 145 VKDQGNCGSCWAFSAVGAV 163
>At1g20850.1 68414.m02612 cysteine endopeptidase, papain-type (XCP2)
identical to papain-type cysteine endopeptidase XCP2
GI:6708183 from [Arabidopsis thaliana]
Length = 356
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 438 EIRDQGSCGSCWAFGAVEAM 497
E+++QGSCGSCWAF V A+
Sbjct: 152 EVKNQGSCGSCWAFSTVAAV 171
>At4g23520.1 68417.m03390 cysteine proteinase, putative contains
similarity to cysteine proteinase (thiol protease) RD21A
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 356
Score = 37.1 bits (82), Expect = 0.009
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
++EI+DQG+C SCWAF V A+
Sbjct: 145 VSEIKDQGTCNSCWAFSTVAAV 166
>At1g47128.1 68414.m05222 cysteine proteinase (RD21A) / thiol
protease identical to SP|P43297 Cysteine proteinase
RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana},
thiol protease RD21A SP:P43297 from [Arabidopsis
thaliana]
Length = 462
Score = 37.1 bits (82), Expect = 0.009
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 438 EIRDQGSCGSCWAFGAVEAM 497
E++DQG CGSCWAF + A+
Sbjct: 151 EVKDQGGCGSCWAFSTIGAV 170
>At1g09850.1 68414.m01109 cysteine protease, papain-like (XBCP3)
identical to papain-like cysteine peptidase XBCP3
GI:14600257 from [Arabidopsis thaliana]; contains Pfam
profiles PF00112: Papain family cysteine protease and
PF00396: Granulin
Length = 437
Score = 36.7 bits (81), Expect = 0.012
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+ ++DQGSCG+CW+F A AM
Sbjct: 130 VTNVKDQGSCGACWSFSATGAM 151
>At4g35350.2 68417.m05022 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 288
Score = 35.9 bits (79), Expect = 0.020
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++DQG CGSCWAF V A+
Sbjct: 152 VKDQGQCGSCWAFSTVAAV 170
>At4g35350.1 68417.m05023 cysteine endopeptidase, papain-type (XCP1)
identical to papain-type cysteine endopeptidase XCP1
GI:6708181 from [Arabidopsis thaliana]
Length = 355
Score = 35.9 bits (79), Expect = 0.020
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++DQG CGSCWAF V A+
Sbjct: 152 VKDQGQCGSCWAFSTVAAV 170
>At5g45890.1 68418.m05644 senescence-specific SAG12 protein (SAG12)
/ cysteine proteinase, putative identical to
senescence-specific protein SAG12 GI:1046373 from
[Arabidopsis thaliana]
Length = 346
Score = 35.5 bits (78), Expect = 0.027
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
I++QGSCG CWAF AV A+
Sbjct: 145 IKNQGSCGCCWAFSAVAAI 163
>At1g06260.1 68414.m00662 cysteine proteinase, putative contains
similarity to thiol-protease, pre-pro-TPE4A protein
GI:3688528 [Pisum sativum]
Length = 343
Score = 35.5 bits (78), Expect = 0.027
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
IR+QG CG CWAF AV A+
Sbjct: 142 IRNQGKCGGCWAFSAVAAI 160
>At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thiol
protease identical to cysteine proteinase RD19a, thiol
protease SP:P43296, GI:435618 from [Arabidopsis
thaliana]
Length = 368
Score = 34.3 bits (75), Expect = 0.063
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
+++QGSCGSCW+F A A+
Sbjct: 150 VKNQGSCGSCWSFSATGAL 168
>At4g11310.1 68417.m01827 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 364
Score = 34.3 bits (75), Expect = 0.063
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+ E++DQG C SCWAF V A+
Sbjct: 149 VTEVKDQGHCRSCWAFSTVGAV 170
>At3g54940.3 68416.m06091 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 368
Score = 34.3 bits (75), Expect = 0.063
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEA 494
+ E+++QG+CGSCWAF A
Sbjct: 149 VTEVKNQGACGSCWAFSTTGA 169
>At3g54940.2 68416.m06090 cysteine proteinase, putative contains
similarity to cysteine proteinase GI:479060 from
[Glycine max]
Length = 211
Score = 34.3 bits (75), Expect = 0.063
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEA 494
+ E+++QG+CGSCWAF A
Sbjct: 149 VTEVKNQGACGSCWAFSTTGA 169
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 33.9 bits (74), Expect = 0.083
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+ E++DQG C SCWAF V A+
Sbjct: 156 VTEVKDQGLCRSCWAFSTVGAV 177
>At5g60360.1 68418.m07568 cysteine proteinase, putative / AALP
protein (AALP) identical to AALP protein GI:7230640 from
[Arabidopsis thaliana]; similar to barley aleurain
Length = 358
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAF---GAVEA 494
++ ++DQG CGSCW F GA+EA
Sbjct: 153 VSPVKDQGGCGSCWTFSTTGALEA 176
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 33.5 bits (73), Expect = 0.11
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
+++QG CGSCWAF V A+
Sbjct: 141 VKNQGQCGSCWAFSTVVAV 159
>At4g16190.1 68417.m02457 cysteine proteinase, putative contains
similarity to papain-like cysteine proteinase isoform I
GI:7381219 from [Ipomoea batatas]
Length = 373
Score = 33.5 bits (73), Expect = 0.11
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
+++QG CGSCW+F A+ A+
Sbjct: 155 VKNQGMCGSCWSFSAIGAL 173
>At3g48350.1 68416.m05277 cysteine proteinase, putative similar to
cysteine endopeptidase precursor [Ricinus communis]
GI:2944446; contains Pfam profile PF00112: Papain family
cysteine protease
Length = 364
Score = 33.1 bits (72), Expect = 0.14
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+ E+++Q CGSCWAF V A+
Sbjct: 138 VTEVKNQQDCGSCWAFSTVAAV 159
>At1g29080.1 68414.m03560 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 346
Score = 33.1 bits (72), Expect = 0.14
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++ QG CG CWAF A+ A+
Sbjct: 145 VKSQGECGGCWAFSAIAAV 163
>At2g21430.1 68415.m02550 cysteine proteinase A494, putative / thiol
protease, putative identical to SP:P43295 Probable
cysteine proteinase A494 precursor [Arabidopsis
thaliana]; strong similarity to cysteine proteinase
RD19A (thiol protease) GI:435618, SP:P43296 from
[Arabidopsis thaliana]
Length = 361
Score = 32.7 bits (71), Expect = 0.19
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
+++QGSCGSCW+F A+
Sbjct: 147 VKNQGSCGSCWSFSTTGAL 165
>At3g43960.1 68416.m04706 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 376
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++ QG CGSCWAF A A+
Sbjct: 143 VKRQGECGSCWAFAATGAV 161
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++ QG CG CWAF AV A+
Sbjct: 145 VKYQGQCGCCWAFSAVAAV 163
>At2g27420.1 68415.m03314 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 348
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAM 497
++ QG CG CWAF AV A+
Sbjct: 143 VKYQGRCGGCWAFSAVAAV 161
>At3g45310.1 68416.m04892 cysteine proteinase, putative similar to
AALP protein GI:7230640 from [Arabidopsis thaliana] and
barley aleurain
Length = 358
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAF---GAVEA 494
++ +++QG CGSCW F GA+EA
Sbjct: 153 VSPVKEQGHCGSCWTFSTTGALEA 176
>At1g29090.1 68414.m03561 peptidase C1A papain family protein
contains similarity to cysteine protease SPCP1
GI:13491750 from [Ipomoea batatas]; contains Pfam
profile PF00112: Papain family cysteine protease
Length = 355
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 441 IRDQGSCGSCWAFGAVEAMTDRVCIYSN 524
++ QG CG CWAF +V A+ I N
Sbjct: 154 VKYQGQCGCCWAFSSVAAVEGLTKIVGN 181
>At3g49340.1 68416.m05394 cysteine proteinase, putative contains
PS00640: Eukaryotic thiol (cysteine) proteases
asparagine active site; similar to cysteine proteinase
GI:535454 from [Alnus glutinosam]
Length = 341
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 432 LNEIRDQGSCGSCWAFGAVEAM 497
+ ++ Q CG CWAF AV A+
Sbjct: 139 VTSVKHQQQCGCCWAFSAVAAV 160
>At1g11950.1 68414.m01381 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain; non-consensus TG acceptor splice site at
exon boundary 79262
Length = 880
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 508 YAFTLMQLKHFHFSAEDLVSCCPICGLGCN 597
Y F ++ + H S +D++ CP C CN
Sbjct: 215 YCFPCIKKWYPHLSTDDILEKCPFCRGTCN 244
>At2g26510.1 68415.m03181 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 551
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 497 HRFHRSESPAAAARSLIPNLVQCRAFGATYP 405
H +PAAA +P++ R G T+P
Sbjct: 6 HHHQHPPAPAAAGHPPVPSMAMARNMGTTWP 36
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,181,016
Number of Sequences: 28952
Number of extensions: 247428
Number of successful extensions: 661
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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