Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B10
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8206| Best HMM Match : Kunitz_legume (HMM E-Value=3) 29 2.3
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 29 3.1
SB_56011| Best HMM Match : Exo_endo_phos (HMM E-Value=0.13) 28 5.4
SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22) 28 5.4
SB_46984| Best HMM Match : Exo_endo_phos (HMM E-Value=4.2e-09) 28 5.4
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.4
SB_41253| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09) 28 5.4
SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012) 28 5.4
SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_33188| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4) 28 5.4
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054) 28 5.4
SB_51391| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_18371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_8206| Best HMM Match : Kunitz_legume (HMM E-Value=3)
Length = 504
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Frame = -3
Query: 282 HPFGVALNHPYCARVQNSLPYFPSEHHKSQIYFLHP------RNFWNIGNLLFLGTVQVL 121
H GV LN PY RV +P F H + H + + + L V V
Sbjct: 142 HCPGVRLNKPYAVRVPMDIPVFTGTHADFLVVVFHKITTTGHQRLQPLFDCLLTIIVNVS 201
Query: 120 PQLKLISQLKA 88
P LK +S + A
Sbjct: 202 PYLKSLSMVAA 212
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +3
Query: 195 GFYGAQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGELGEGRKTR---TGSVFTAAN-S 362
G Y A GGN+ +++DG + GG G +G T G + N +
Sbjct: 118 GGYYADGNYAGGNYADGNHIDG---NYTGG--NYADGNYADGNYTDGYYAGGYYADGNYA 172
Query: 363 KGVYGSGNYDLSNLEGRNF 419
G Y GNY N G N+
Sbjct: 173 GGYYADGNYIDGNYTGGNY 191
>SB_56011| Best HMM Match : Exo_endo_phos (HMM E-Value=0.13)
Length = 307
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 42 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 83
>SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22)
Length = 726
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 112 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 153
>SB_46984| Best HMM Match : Exo_endo_phos (HMM E-Value=4.2e-09)
Length = 476
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1858
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 863 KVAEGVEYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 904
>SB_41253| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09)
Length = 404
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
Length = 826
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 438 KVAEGVEYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 479
>SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 623 KVAEGVEYLPSEN-RNIIWCKLKRNYFETEKDIFLGTVYFSPQ 664
>SB_33188| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4)
Length = 200
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 93 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 134
>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
Length = 1012
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 243 RVQNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQ 115
+V + Y PSE+ ++ I+ RN++ +FLGTV PQ
Sbjct: 684 KVAEGVAYLPSEN-RNIIWCKLKRNYFGTEKDIFLGTVYFSPQ 725
>SB_51391| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 462 RRWGLRVIKRNAFLGNCDLRGYSDHNYPTRKHLLN*QQ*IHYQF 331
R+ G+ +++ F+G L+G D N RKH L+ + +Y+F
Sbjct: 11 RQHGIAGLRQLNFIGKKKLQGDFDSNESQRKHTLSEHRNENYRF 54
>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 216 PSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLP 118
P EH K I P + W+IG LLFL +Q +P
Sbjct: 44 PKEHRKPLI---PPDDRWSIGVLLFLYVLQGIP 73
>SB_18371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 437 LMTRNPHLLYHLMPGYNTTNRL 502
L+T P +YHL+PGY + + L
Sbjct: 196 LLTWIPDSIYHLLPGYKSNSSL 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,246,926
Number of Sequences: 59808
Number of extensions: 248840
Number of successful extensions: 555
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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