SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B10
         (524 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89713-1|CAA61857.1|  907|Homo sapiens death associated protein ...    31   1.9  
U76111-1|AAC51166.1|  907|Homo sapiens translation repressor NAT...    31   1.9  
U73824-1|AAB49973.1|  907|Homo sapiens p97 protein.                    31   1.9  
BC111415-1|AAI11416.1|  907|Homo sapiens eukaryotic translation ...    31   1.9  
BC065276-1|AAH65276.1|  701|Homo sapiens EIF4G2 protein protein.       31   1.9  
BC043149-1|AAH43149.2|  907|Homo sapiens eukaryotic translation ...    31   1.9  
BC039851-1|AAH39851.1|  907|Homo sapiens eukaryotic translation ...    31   1.9  
BC018975-1|AAH18975.1|  907|Homo sapiens eukaryotic translation ...    31   1.9  
AY513274-1|AAT08027.1|  701|Homo sapiens aging-associated protei...    31   1.9  
AK223548-1|BAD97268.1|  907|Homo sapiens eukaryotic translation ...    31   1.9  
AB209267-1|BAD92504.1|  940|Homo sapiens eukaryotic translation ...    31   1.9  
BC035372-1|AAH35372.1|  788|Homo sapiens chromosome 17 open read...    31   2.5  
BC032219-1|AAH32219.2|  560|Homo sapiens C17orf28 protein protein.     31   2.5  
AK074401-1|BAB85070.1|  625|Homo sapiens protein ( Homo sapiens ...    31   2.5  
BC018746-1|AAH18746.1|  907|Homo sapiens eukaryotic translation ...    31   3.3  

>X89713-1|CAA61857.1|  907|Homo sapiens death associated protein 5
           protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>U76111-1|AAC51166.1|  907|Homo sapiens translation repressor NAT1
           protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>U73824-1|AAB49973.1|  907|Homo sapiens p97 protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>BC111415-1|AAI11416.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>BC065276-1|AAH65276.1|  701|Homo sapiens EIF4G2 protein protein.
          Length = 701

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 214 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 247


>BC043149-1|AAH43149.2|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>BC039851-1|AAH39851.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>BC018975-1|AAH18975.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>AY513274-1|AAT08027.1|  701|Homo sapiens aging-associated protein 1
           protein.
          Length = 701

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 214 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 247


>AK223548-1|BAD97268.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 variant protein.
          Length = 907

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 453


>AB209267-1|BAD92504.1|  940|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 variant protein.
          Length = 940

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L  +Q  GL+ Q+QG+
Sbjct: 453 SQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQ 486


>BC035372-1|AAH35372.1|  788|Homo sapiens chromosome 17 open reading
           frame 28 protein.
          Length = 788

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = -3

Query: 276 FGVALNHPYCARVQNSLPYFPSEHHKSQIYFLHP------RNFWNIGNLLFLGTVQVLPQ 115
           FGV LN PY  RV   +P F   H    I   H       +    + + L    V V P 
Sbjct: 435 FGVRLNKPYSIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPY 494

Query: 114 LKLISQLKA 88
           LK +S + A
Sbjct: 495 LKSLSMVTA 503


>BC032219-1|AAH32219.2|  560|Homo sapiens C17orf28 protein protein.
          Length = 560

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = -3

Query: 276 FGVALNHPYCARVQNSLPYFPSEHHKSQIYFLHP------RNFWNIGNLLFLGTVQVLPQ 115
           FGV LN PY  RV   +P F   H    I   H       +    + + L    V V P 
Sbjct: 207 FGVRLNKPYSIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPY 266

Query: 114 LKLISQLKA 88
           LK +S + A
Sbjct: 267 LKSLSMVTA 275


>AK074401-1|BAB85070.1|  625|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23821 fis, clone HUV00353. ).
          Length = 625

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = -3

Query: 276 FGVALNHPYCARVQNSLPYFPSEHHKSQIYFLHP------RNFWNIGNLLFLGTVQVLPQ 115
           FGV LN PY  RV   +P F   H    I   H       +    + + L    V V P 
Sbjct: 435 FGVRLNKPYSIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPY 494

Query: 114 LKLISQLKA 88
           LK +S + A
Sbjct: 495 LKSLSMVTA 503


>BC018746-1|AAH18746.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 207 AQRGNMGGNFERAHNMDGLAQHQMGGLVKQVQGE 308
           +Q G MGG F ++  +  L   Q  GL+ Q+QG+
Sbjct: 420 SQFGEMGGKFMKSQGLSQLYHSQSQGLLSQLQGQ 453


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,875,963
Number of Sequences: 237096
Number of extensions: 1176750
Number of successful extensions: 2217
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2217
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -