Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B09
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   0.28 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   0.50 
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             24   0.50 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   4.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   4.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.1  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 0.28
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 59  DRSILAIXXXXXXXDSFEYWIFLAQHQENIRDYPC 163
           DRS +         DS E  I L   +EN R+Y C
Sbjct: 36  DRSNMTFHELKKLRDSSEARIKLINEEENFRNYGC 70


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 153 TTPVDDKESEHREGFTALV 209
           T P+DD  S+  EGF A++
Sbjct: 150 TNPLDDSISQANEGFCAVI 168



 Score = 20.2 bits (40), Expect = 8.1
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
 Frame = +3

Query: 174 ESEHREGFTALVREMKQALNVKPNMQLVISVLPNV-NSSIYFDV--PSIINLV-----DI 329
           E +H+  F  +  +   +    P   ++ SV     N++ Y     P ++        D+
Sbjct: 279 EQQHKAMFLVVTAQPVHSAYKAPEETIISSVFTTRHNATCYLSHVDPDVVQYFGYLPQDM 338

Query: 330 VNIQAFDYYTPE 365
           V    FD+Y PE
Sbjct: 339 VGRSLFDFYHPE 350


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 153 TTPVDDKESEHREGFTALV 209
           T P+DD  S+  EGF A++
Sbjct: 145 TNPLDDSISQANEGFCAVI 163


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 118 DLSGTASRKHSGLPLLM 168
           D++G   +KH   PLLM
Sbjct: 131 DIAGLRKKKHKVNPLLM 147


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 18  NSALLLAEQYGFDGIDLSWQLPKRKPKKI 104
           N AL LAE Y   G  +S    KR+  K+
Sbjct: 886 NPALALAEPYNQRGTVVSPPPTKRRTMKV 914


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 18   NSALLLAEQYGFDGIDLSWQLPKRKPKKI 104
            N AL LAE Y   G  +S    KR+  K+
Sbjct: 924  NPALALAEPYNQRGTVVSPPPTKRRTMKV 952


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 244 ICS*LSAFCQT*IAPFTLTS 303
           IC+ L+A CQ  +  F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 199  VKPSLCSDSLSSTGVVPNVFL 137
            V  ++CSD  S  GV+ ++ +
Sbjct: 971  VNETVCSDYFSQGGVIESIMV 991


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,208
Number of Sequences: 438
Number of extensions: 1490
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)