Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B08
         (574 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g47710.1 68414.m05302 serpin, putative / serine protease inhi...    41   5e-04
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    38   0.006
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ...    30   1.3  
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi...    28   3.8  
At5g49340.1 68418.m06105 expressed protein similar to unknown pr...    28   5.1  
At4g36480.1 68417.m05180 aminotransferase class I and II family ...    27   6.7  
At4g35110.2 68417.m04989 expressed protein                             27   6.7  
At4g35110.1 68417.m04988 expressed protein                             27   6.7  
At5g09290.1 68418.m01076 3'(2'),5'-bisphosphate nucleotidase, pu...    27   8.9  

>At1g47710.1 68414.m05302 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 391

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 5/155 (3%)
 Frame = +3

Query: 114 LNELDKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELLTSLDIPNDDCIRSSFTSITSNL- 290
           +  + ++ NV+ SP S                 +++L+ L   + D + S  + I S + 
Sbjct: 22  ITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVSAVL 81

Query: 291 ---KSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKLNFNDGAASAAA-INK 458
               +  G  L++AN  ++ +         K+     + A+  + +F   A    A +N 
Sbjct: 82  ADGSANGGPKLSVANGAWIDKS-LSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNS 140

Query: 459 WVESKTXXXXXXXXXXXXXXXXXXVVLVNALYFKG 563
           W E +T                  ++  NALYFKG
Sbjct: 141 WAEKETNGLITEVLPEGSADSMTKLIFANALYFKG 175


>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 7/176 (3%)
 Frame = +3

Query: 54  ELTMDAKAISSAVAKFSAKFLN-ELDKSQNVVSSPLSAEYXXXXXXXXXXDPAHEELLTS 230
           EL    +  ++ VA+ + K +  ++    NVV SP+S                 EE+L+ 
Sbjct: 2   ELGKSIENQNNVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61

Query: 231 LDIPNDDCIRSSFTSITSNLKSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFE 410
           L  P+ D + +    I         + L+ A+ V++ +  Y L    KE     + AS  
Sbjct: 62  LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSY-LKPSFKELLENSYKASCS 120

Query: 411 KLNFNDGAASAA-AINKWVESKT-----XXXXXXXXXXXXXXXXXXVVLVNALYFK 560
           +++F          +N W +  T                       ++L NA+YFK
Sbjct: 121 QVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFK 176


>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
           SP|Q07283 Trichohyalin {Homo sapiens}
          Length = 1400

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 436 AAPSLKFNFSKEASNTLTASSFSSECSSYGPSF 338
           AAP LK +F   ASN+ T  S  S  SS  P+F
Sbjct: 279 AAPILKSDFRSSASNSKTTGSQGSVDSSSSPTF 311


>At2g25240.1 68415.m03020 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 324

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 3/112 (2%)
 Frame = +3

Query: 237 IPNDDCIRSSFTSITSNLKSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDASFEKL 416
           +P+ D +      I         + L+IAN V++ +  + L    K+     + A+  ++
Sbjct: 2   LPSTDHLNLVLAQIIDGGTEKSDLRLSIANGVWIDKF-FSLKLSFKDLLENSYKATCSQV 60

Query: 417 NFNDGAASAA-AINKWVESKTXXXXXXXXXXXXXXX--XXXVVLVNALYFKG 563
           +F    +     +N W E  T                    +VL NA+YFKG
Sbjct: 61  DFASKPSEVIDEVNTWAEVHTNGLIKQILSRDSIDTIRSSTLVLANAVYFKG 112


>At5g49340.1 68418.m06105 expressed protein similar to unknown
           protein (emb|CAB82953.1)
          Length = 457

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -1

Query: 487 IRSFVLLSTHLLIAAA--DAAPSLKFNFSKEASNTLTASSFSSECSSYGPSFKYTLFAMF 314
           + S   LS  LL +++  D +PSL    S   S  LTA++F S  SSY  S   T   + 
Sbjct: 21  LTSLFFLSLFLLSSSSLSDFSPSLIV--SSFTSRLLTAANFFSSPSSYTSSASDTTMFLS 78

Query: 313 SVIP 302
           SV P
Sbjct: 79  SVSP 82


>At4g36480.1 68417.m05180 aminotransferase class I and II family
           protein similar to Serine palmitoyltransferase 1 (EC
           2.3.1.50) from Homo sapiens [SP|O15269], Mus musculus
           [SP|O35704], Cricetulus griseus [SP|O54695]
          Length = 482

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 340 FKYTLFAMFSVIPCIDFKLDVIEVNE 263
           + Y L  MFS IPC   K DVI  +E
Sbjct: 175 YSYGLSTMFSTIPCFCKKGDVIVADE 200


>At4g35110.2 68417.m04989 expressed protein
          Length = 386

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 473 FALNPFVDCSSRCSSIIKV*FLKRSIKHFNSIFLQFGMQF 354
           +A NPF +C+S C   I    +K++ K  +S  L F   F
Sbjct: 13  YADNPFHECASACLEKIAQGHVKKNTKKQSSRLLSFSGSF 52


>At4g35110.1 68417.m04988 expressed protein
          Length = 386

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 473 FALNPFVDCSSRCSSIIKV*FLKRSIKHFNSIFLQFGMQF 354
           +A NPF +C+S C   I    +K++ K  +S  L F   F
Sbjct: 13  YADNPFHECASACLEKIAQGHVKKNTKKQSSRLLSFSGSF 52


>At5g09290.1 68418.m01076 3'(2'),5'-bisphosphate nucleotidase,
           putative / inositol polyphosphate 1-phosphatase,
           putative similar to SP|Q42546 3'(2'),5'-bisphosphate
           nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana};
           contains Pfam profile PF00459: Inositol monophosphatase
           family
          Length = 345

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +3

Query: 270 TSITSNLKSIQGITLNIANKVYLKEGPYELHSELKEDAVKVFDA 401
           T + S+ K I  I  +IANK+ +K  P  +HS++K  A+   DA
Sbjct: 217 TFVESSHKPIP-IHSSIANKLGIKAPPLRIHSQVKYAALARGDA 259


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,893,799
Number of Sequences: 28952
Number of extensions: 166988
Number of successful extensions: 468
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)